Gene Daci_1254 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1254 
Symbol 
ID5746809 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1395698 
End bp1396132 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content69% 
IMG OID641296333 
Productthioredoxin 
Protein accessionYP_001562283 
Protein GI160896701 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3118] Thioredoxin domain-containing protein 
TIGRFAM ID[TIGR01068] thioredoxin
[TIGR02098] MJ0042 family finger-like domain 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGACA AGCTGCATTT CGTCTGCCCC CATTGCCACA CCACCAACCG CATTGCGGCC 
GACCAGCTCG GCAGCGCGCC TGACTGCGGC AGCTGCCACC AGCCGCTGGT CACCGGTCAG
CCCGTGGCGC TGGATGCGCA AAGCTTTGCC AGGCATGTGG GGCGCAGCCA GGCGCCGGTG
GTGGTCGATT TCTGGGCGCC CTGGTGCGGC CCCTGCCGCA TGATGGCGCC GGCCTTCGAG
CAGGCGGCGC AGGCGCTGGC GCCCGGCGTG CAGCTGGCCA AGCTCGATAC CGAAGCCCAT
CCCCAGGCTG CCGCGCCCTG GAACATCCGC AGCATCCCGA CCATGGTGGT GTTCAAGGAA
GGACGCGAGA TCGCCCGTGT CTCCGGCGCT TTGCCGGCCG GCGAGATCGT GCGCTGGGTG
CGTTCGGTCG TCTGA
 
Protein sequence
MSDKLHFVCP HCHTTNRIAA DQLGSAPDCG SCHQPLVTGQ PVALDAQSFA RHVGRSQAPV 
VVDFWAPWCG PCRMMAPAFE QAAQALAPGV QLAKLDTEAH PQAAAPWNIR SIPTMVVFKE
GREIARVSGA LPAGEIVRWV RSVV