| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_1240 |
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| Symbol | |
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| ID | 5746795 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 1383241 |
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| End bp | 1384833 |
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| Gene Length | 1593 bp |
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| Protein Length | 530 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641296319 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001562269 |
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| Protein GI | 160896687 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCATGA AGATTCTGGG CAGTTCTTTG CTGGCCGCAG GCCTGTTGAC CTCGGCCGCG
CTGGCCCAGG CCGAGACCGT GCGCTGGGCG CGCGGCTCCG ATCCGACTTC GCTGGACCCG
CATGCCTTCA ACGTGGGCAC CAATTTCGTG CTGCTGCACC AGATCTACGA AACCCTGGTC
ATCCGCTCGG CCGACGGCAA GCTGGTGCCC ACGCTGGCCA CCTCGTGGAA GATGACCTCC
GACCCGTCGG TCTGGGAGTT CAAGCTGCGT CCCAACGTCA AGTTCCATGA CGGCACGCCG
TTCACGGCGC GCGACGTGGT CTTCTCGCTG AACCGCGCCA AGGGCGAGAA CGCCCAGGTC
AAGTCCCTGC TGTCCTCGAT GGAGGAGGCC AAGGCCGTGG ACGATCTCAC GGTGCAGGTG
AAGACCAAGG GGCCGAACCT GATCTTCCCC GACAACCTGA CCAACCTCTT CATCATGAGC
GAGAAGTGGT CCAAGGCCAA CGGCGCCGAG ACCACGCAGG ACACGGCCAG CAAGACCGAG
AACGGCGCCA CGCGCGCGGC CAACGGCACG GGCGCCTATG TGCTGGCCAG CCGCGAGGTC
GATTCGAAGA CGGTGATGAA GCTCAATCCC GACTACTGGG GCAAGGGCCA GTTCCCGCTG
CAGGTGACCG AGCTGATCTA CCTGCCCATC AAGTCCCCGG CCACGCGCGT GGCGGCCCTG
CTGTCGGGCG AGGTGGACTT CGCCCAGGAC ATTCCCGCGC AGGACGTGGC GCGCCTGAAG
CAGGACAAGC GCCTGCGCAT CAATGAAGGC CCCGAGAACC GCTCCATCTT CCTGGGGCTG
AACGTGGGTG CGGCAGAGCT CAAGAGCAGC AACGTCAAGG GCAAGAATCC GCTGGCCGAT
CCCAAGGTGC GCCAGGCCAT CGAGCTGGCC ATCGACCGCG ATGCGATCAA GCGCTCGGTG
ATGCGCGGCC TGTCGATTCC CACGGGCGTG ATCGCGCCGT CGTTCGTCAA TGGCTATGAC
AAGGCCTTCG CGGCCTATCC CAAGGCGGAT GCCGCCAAGG CCAAGCAGCT GCTGGCCGAG
GCGGGCTACC CCAACGGCTT CACCATCACG CTGAATACGC CCAATGACCG CTATGTGAAC
GACGAGGCCA TTGCCACGGC GGTGGCGGGC TTCCTGGGCC GCATCGGCAT CAAGACCGAA
GTCTCGGCCC GGCCGATTGC CATGCACAGC GTGTCGCTGA CCAAGGCGGA CAGCGACTTC
TACCTGTACG GCTGGGGCGT GCCCACCTAT GACTCGGCCT ACATCTTCGA CTTCCTGGTG
CACACGCGCG GCAAGGATAG CCGTGGCGCG CAGAACGCGA CGCACTACAG CAATGCCGAT
GTGGATGCCA AGATCCTGTC CCTGTCCTCG GAGAGCGACA AGGCAAAGCG CGATGCCACC
ATCAAGAGCA TCTGGGAGAC CGTGCAAAAG GAGCGCTTCT ACATTGCGCT GCATGACCAG
GTGATCCACT TCGCGTCCGT GCCCCGGATC AATGTGCCCG TGCACCCGGA CAACGCGCTG
CACTTCAAGT TCGTCAAGTT CGAGAAGAAG TAA
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| Protein sequence | MIMKILGSSL LAAGLLTSAA LAQAETVRWA RGSDPTSLDP HAFNVGTNFV LLHQIYETLV
IRSADGKLVP TLATSWKMTS DPSVWEFKLR PNVKFHDGTP FTARDVVFSL NRAKGENAQV
KSLLSSMEEA KAVDDLTVQV KTKGPNLIFP DNLTNLFIMS EKWSKANGAE TTQDTASKTE
NGATRAANGT GAYVLASREV DSKTVMKLNP DYWGKGQFPL QVTELIYLPI KSPATRVAAL
LSGEVDFAQD IPAQDVARLK QDKRLRINEG PENRSIFLGL NVGAAELKSS NVKGKNPLAD
PKVRQAIELA IDRDAIKRSV MRGLSIPTGV IAPSFVNGYD KAFAAYPKAD AAKAKQLLAE
AGYPNGFTIT LNTPNDRYVN DEAIATAVAG FLGRIGIKTE VSARPIAMHS VSLTKADSDF
YLYGWGVPTY DSAYIFDFLV HTRGKDSRGA QNATHYSNAD VDAKILSLSS ESDKAKRDAT
IKSIWETVQK ERFYIALHDQ VIHFASVPRI NVPVHPDNAL HFKFVKFEKK
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