| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_1201 |
|---|
| Symbol | |
|---|
| ID | 5746756 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | - |
|---|
| Start bp | 1335690 |
|---|
| End bp | 1337186 |
|---|
| Gene Length | 1497 bp |
|---|
| Protein Length | 498 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641296281 |
|---|
| Product | AMP nucleosidase |
|---|
| Protein accession | YP_001562231 |
|---|
| Protein GI | 160896649 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0775] Nucleoside phosphorylase |
|---|
| TIGRFAM ID | [TIGR01717] AMP nucleosidase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTTTTGC TTCACAACCC CTCGCAGGCC TCCAGGGCCG CAGCCACCTT GCACACCGAC
CCCCAGCGGG CCCTGGAGCA CGTACAGCAG ATCTACCGGG AGCAGATAGA GCACCTTCGC
TCGAACATGC AGCGCTTCGT CTCCGGCGAA ACCCCGGCCG CTCCCGTCCA CGCCTACTAC
CCCTTCGTTC GCATGCACAC GAGCACCGTG GCACGCGCCG ACACGCAGCT GGCCTACGGC
TTCGTCGAGG GCCCGGGCAC GCACGAGGCC ACGCTCACGC GGCCCGACCT GTTCTCGCGC
TACTACGCCG AGCAGTTCCG CCTGCTGATC AAGAGCCACG GCGTGCCGCT GGAGGTGGGC
CTGAGCGACA AGCCCATTCC CATCCACTTC TCGTTCGCCG AGAACGACCA CATCGAGGGA
ACGCTCACGC GCGAGCGGCG CCAGCTGATG CGCGACGTGT TCGACCTGCC CGACCTCGAA
GCCATGGACG ACGGCATTGC CAACGGCACC TGGCGCCCGC ATCCCGGCGA GGCCCTGCCG
CTGTCCCTGT TCACCGCCCC GCGCGTGGAC TACTCGCTGC ACCGCCTGCG CCACTACACG
GGCACCCAGC CCGAGTGGTT CCAGAACTTC GTGCTGTTCA CCAACTACCA GTTCTACATC
GACGAATTCA TCCGCCTGGG CCACGCCGAG ATGGCCCGGG AGGACAGCGA GTACGTGGCC
TTCATCGAGC CCGGCAACGT GGTCACGCGC CGCACCGGCC TGCCGGCCCA GCCCAATGAC
GAGCTGGGCA CGCCGCCGCC GCGCCTGCCG CAGATGCCGG CCTACCACCT GGTGCGCGCC
GACCACAGTG GCATCACCAT GGTCAACATC GGCGTGGGCC CGGCCAATGC CAAGACCATC
ACCGACCACA TTGCCGTGCT GCGCCCGCAT GCCTGGATGA TGCTGGGCCA CTGCGCGGGC
CTGCGCAACA GCCAGCAACT GGGCGACTAC GTGCTGGCCC ACGCCTATGT GCGCGAGGAC
CATGTGCTGG ACGAGGAGCT GCCGCTGTGG GTGCCCATTC CCGCGCTGGC CGAAATCCAG
CTGGCACTGC AGCAGGCCGT GGCCGACGTC ACGCAGATGG ACGGGCCCGA CCTCAAGCGC
ATCATGCGCA CCGGCACCGT GGCCAGCACC GACAACCGCA ATTGGGAGCT GCTGCCCAAC
AACCTGCCCC AGCTGCGCTT CAGCCAGAGC CGCGCCGTGG CGCTGGACAT GGAAAGCGCC
ACCATCGCGG CCAACGGATT CCGCTTCCGC GTGCCCTATG GAACGCTGCT GTGCGTGTCC
GACAAGCCGC TGCACGGCGA GATCAAGCTG CCCGGCATGG CCAACCACTT CTACCGCGAG
CGCGTGGACC AGCATCTGCG CATCGGCATG CGCGCCATCG ACATCCTGCG CGAAGGCGGC
ACCCAGCGCC TGCACAGCCG CAAGCTGCGC AGCTTCGCGG AGGTGGCGTT CCAGTAG
|
|---|
| Protein sequence | MVLLHNPSQA SRAAATLHTD PQRALEHVQQ IYREQIEHLR SNMQRFVSGE TPAAPVHAYY
PFVRMHTSTV ARADTQLAYG FVEGPGTHEA TLTRPDLFSR YYAEQFRLLI KSHGVPLEVG
LSDKPIPIHF SFAENDHIEG TLTRERRQLM RDVFDLPDLE AMDDGIANGT WRPHPGEALP
LSLFTAPRVD YSLHRLRHYT GTQPEWFQNF VLFTNYQFYI DEFIRLGHAE MAREDSEYVA
FIEPGNVVTR RTGLPAQPND ELGTPPPRLP QMPAYHLVRA DHSGITMVNI GVGPANAKTI
TDHIAVLRPH AWMMLGHCAG LRNSQQLGDY VLAHAYVRED HVLDEELPLW VPIPALAEIQ
LALQQAVADV TQMDGPDLKR IMRTGTVAST DNRNWELLPN NLPQLRFSQS RAVALDMESA
TIAANGFRFR VPYGTLLCVS DKPLHGEIKL PGMANHFYRE RVDQHLRIGM RAIDILREGG
TQRLHSRKLR SFAEVAFQ
|
|---|
| |