Gene Daci_1193 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1193 
Symbol 
ID5746748 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1327942 
End bp1329006 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content70% 
IMG OID641296273 
Productserine/threonine protein kinase 
Protein accessionYP_001562223 
Protein GI160896641 
COG category[R] General function prediction only 
COG ID[COG2334] Putative homoserine kinase type II (protein kinase fold) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGCCA CACCGCACGA TCCTGATCTG AATGTCGTCC CCGACGACGA CTCGCACGCC 
TATGCCCGCC TCACGCCCGA CGTGGTGCTC GACGCCCTGG CCTCGGTCGG CCTGTGGGGC
GACGGCCGGC TCACGGCCCT GGCCTCCTAC GAGAACCGCG TCTACCAGGC CGTACTGGAG
GACGGCGATC GCGTCGTGCT CAAGTTCTAC CGCCCGGGCC GCTGGAGCCG CGATCAGATC
CTGGAGGAGC ACGCCTTCAG CGCCGAGCTG ACGGCCGCCG AAGTGCCCGC CGTGCCCCCG
CTGGTGCTGG AAGGCGCCAC GCTGCACAGC CACGCGGGCT TTGATTTCTC GGTCAGCCCC
TGGCGCGGAG GCCGTCCGCC CGAGCTGGAC GACTTCGAGG TGCTGGAGTG GACCGGGCGC
TTCCTGGCCC GCATCCATAC CGTGGGCGAA GCCCGTCCGT TTGCGCACCG GCCCGCGCTG
GACCTGGCCA CCTTCGGCCA CGACTCCATG CAATGGCTGC TGGACCGGCA AATGATTCCG
CTGGAAGTGG AATCCACCTG GAAGGCCGCC TGCCAGCGCG CCCTGGACCT GATGGCCCCC
GCTGCCGACG GCCTGAGCGC GGCCGGCCAC TTCGGCCTGC ACAGCGCGCG CACGCTGCGC
CTGCACGGCG ACTGCCATCC CGGCAACGTG CTGTGGACGC CGCTGGACGA CGAAGGCCGC
GGCGGCCCGC ATTTCGTGGA CCTGGACGAT GCGCGCACCG GCCCGGCCGT GCAGGACCTG
TGGATGCTGC TGTCGGGCGA CCGGGGCCAG CGCACGCGCC AGCTGGGCGC CCTGCTGGAT
GGCTATGAAC AGTTCCGTCC CTTCGACCGC CGCGAGCTGG CCCTGATCGA GCCGCTGCGC
ACGCTGCGCC TGATCCACTA CAGCGCCTGG CTGGCGCGGC GCCAGGACGA CCCGATCTTT
GCCATCAACT TCCCCTGGTT CGGCACGCCC GACTACTGGC GCGGGCAGGT GGACATGCTC
AACGAGCAGA TCGAGGCCAT GCAGGAAGAG CCTCTATACG CCTGA
 
Protein sequence
MSATPHDPDL NVVPDDDSHA YARLTPDVVL DALASVGLWG DGRLTALASY ENRVYQAVLE 
DGDRVVLKFY RPGRWSRDQI LEEHAFSAEL TAAEVPAVPP LVLEGATLHS HAGFDFSVSP
WRGGRPPELD DFEVLEWTGR FLARIHTVGE ARPFAHRPAL DLATFGHDSM QWLLDRQMIP
LEVESTWKAA CQRALDLMAP AADGLSAAGH FGLHSARTLR LHGDCHPGNV LWTPLDDEGR
GGPHFVDLDD ARTGPAVQDL WMLLSGDRGQ RTRQLGALLD GYEQFRPFDR RELALIEPLR
TLRLIHYSAW LARRQDDPIF AINFPWFGTP DYWRGQVDML NEQIEAMQEE PLYA