Gene Daci_1172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1172 
Symbol 
ID5746727 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1304485 
End bp1305165 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content68% 
IMG OID641296252 
Product2OG-Fe(II) oxygenase 
Protein accessionYP_001562202 
Protein GI160896620 
COG category[S] Function unknown 
COG ID[COG3128] Uncharacterized iron-regulated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCTCC GCATACCCGC CCTGCTCAGC CCCGACGAAG TGCGCCAATG CCGCCAGGCG 
CTGGAGCAGG CCCCGTGGCA GGACGGCCGC GCCACGGCCG GCCCTCTGGC GGCCCAGGTC
AAGGCCAACC TGCAGCTGCC GCTGGACAGC CAGGCAGGCC AGGCGATAGG CAACCTCATC
CTCGACAAGC TGGGGGCCAG CGCGCTGTTC ATGTCGGCCA CCCTGCCGCT GAAGGTGCTG
CCGCCGCGCT TCAACCGCTA CGAGGGCGGC GGCACCTACG GCAACCATAT AGACAACGCC
ATCTTCACCA TCCCCGGCAC GGCCATCAAG GTGCGCAGCG ATGTCTCCAC CACCGTGTTC
TTCAGCGAGC CCGACGAGTA CGAAGGCGGC GAACTGATCG TGGAGGACAC CTTCGGCCAC
CAGAGCGTGA AGCTGGCCGC GGGCGACGCC ATCGTCTACC CCGGCACCAG CCTGCACCGC
GTCAACCCCG TCACGCGCGG CACGCGCTAC GCCAGCTTCT TCTGGACGCA CAGCCTCGTG
GCCTCGGACG AGAAGCGCCG CATCCTGTTC GACCTGGACC AGCAGATCCA GCAACTGACG
GTGCGCCACC CGGGCGACCC CGCGCTTTCC GCGCTGTCCG GCACGTACCA CAACCTGTTG
CGGATGTGGT CGCAGGCCTG A
 
Protein sequence
MMLRIPALLS PDEVRQCRQA LEQAPWQDGR ATAGPLAAQV KANLQLPLDS QAGQAIGNLI 
LDKLGASALF MSATLPLKVL PPRFNRYEGG GTYGNHIDNA IFTIPGTAIK VRSDVSTTVF
FSEPDEYEGG ELIVEDTFGH QSVKLAAGDA IVYPGTSLHR VNPVTRGTRY ASFFWTHSLV
ASDEKRRILF DLDQQIQQLT VRHPGDPALS ALSGTYHNLL RMWSQA