Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_1159 |
Symbol | |
ID | 5746714 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 1288328 |
End bp | 1290265 |
Gene Length | 1938 bp |
Protein Length | 645 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641296239 |
Product | AMP-dependent synthetase and ligase |
Protein accession | YP_001562189 |
Protein GI | 160896607 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1022] Long-chain acyl-CoA synthetases (AMP-forming) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 57 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACGACCA CGTTCCCGCA CCTGCTGCTC CAGCATGCCG CCCAGCGCCC CCAGGCGCCG GCGCTGCGCG AGAAGGAATA CGGCATCTGG CAGACCTGGA GCTGGAGCGA GGCCGCCGAG ACCGTGCGCC ACATGGCCTG CGGCCTGGCG GCGCTGGGCC TGGCACGCGG CCAGAATCTG GCCTTCATCA GCGACAACCG GCCCCATGTC TACATGGGCT TCATTGCCGT GCAGGCGCTG GGCGGCGTAC CGATCCCGCT GTACCAGGAT GCCGTGGCCG CCGAGATGCG CTTCGTCATC GAGGATGCCG AGATCGACTT CGCCTTTGCC GAGAACCAGG AGCAGGTCGA CAAGCTGCTG GAGGTGCGCG AGAGCGTCTC CGGCCTCGGC CACATCATCT ATGACGACCC GCGCGGCCTG CGCCACTACG ACCAGCCGGG GCTGATCAGC ACCGAGGCGC TGCTGCAAAA GGGCCAGGAG TGGGATGCCG CACACCCGGG CGCCTGGGAT GCGATGCTGG CCGCGCTGTC GCCCGACGAT GTCTCGGTCA TCCTCTACAC CTCGGGCACG ACCGGCAAGC CCAAGGGCGT GTGCCAGACG CACCGCAGCT TTGGCGAGTC GGCACGCGGC GGCGTGCAGG TGGACCGCCT GGGCCCCGGC GACAACGTGA TCTCCTACCT GCCCCCGGCC TGGGTGGGCG ACCACCTGTT TTCCTTCGCG CAGTGGCTGG TGGCGGGCTT CACCATCAAC TGCCCGGAGT CGGCCTCGAC CGTGTCCATC GACCTGCGCG AGATCGGCCC CAGCTACTAC TTCGCACCGC CGCGCATCTT CGAAGGCATG CTGACCTCGG TGTCCATCCG CATGGAGGAT GCCGCGCCCT TCAAGCAATG GATGTACGGC CGCGCCATGG CCGTGGCGCG CCGCGTGGGC TCGGACATCC TGGACGGCAA GACGGTGGGC ACGCTGGACC GCCTGAAGTA CGCGCTGGGC GACCTGTGCA TCTACGGCCC GCTGCGCAAC GCCATGGGCC TGTCGCGCAT CCGCGTGGCC TATACGGCGG GTGCGGCCAT CGGGCCCGAG CTGTTCCGCT TCTTCCGCTC CATCGGCATC AACCTCAAGC AGCTCTACGG CCAGACCGAG ACCTGCGCCT ATGTGTGCAT ACAGCGCGAC GGGCAGGTGG AGCTGAGCAG CGTGGGCCAG GCCGCACCGG GCATCGAGCT GAAGATCGCC GACAACGGCG AGGTGCTGCT CAAGGGCGTG TCCGTGCTCA AGGAGTACTA CAAGCGCCCC GACGCCACGG CCGAGGTGGT GGATGCCGAC GGCTGGTTCC ACACGGGCGA TGCCGGCGTG ATCGATGCCA GCGGCCAGCT GCGCATCATC GACCGCGCCA AGGACGTGGG CAAGACCAGC CGGGGCGCCA TGTTCGCGCC CAACTACATC GAGAACAAGC TCAAGTTCTT CCCACAGATC AAGGAGGCGG TGTGCTTCGG CCACGGCCGC GACCAGGTCT GCGCCTTCAT CAACATCGAC TACGAGGCCG TGGGCAACTG GGCCGAGCGC CAGGGCCTGC CCTATGGCGG CTATGTGGAC CTGGCATCGA AGGCCAAGGT GCTGGAGATG GTGGCCGACT GCGTGGCCCA GGTGAACGCC GACCTGGCCG CCGAAGCCGG CATGGCCGAC ACGCAGGTGG CGCGCTTCCT GGTGCTGCAC AAGGAGCTGG ACCCCGACGA CGACGAGCTG ACCCGCACGC GCAAGGTGCG CCGCGGCTTC ATTGCCGACA AGTACGGCGT GCTGGTCGAT GCGCTGTACA CGGGCAAGCG TGAGCAGTTC ATCGAGACCC AGGTCAAGTT CGAGGACGGC CGCACCGGCA GCGTCAGCGC CACGCTGTCC ATCATCGATG CCAAAACCCA TTCGGTGGCC GCCACCGCCA GGGCCTGA
|
Protein sequence | MTTTFPHLLL QHAAQRPQAP ALREKEYGIW QTWSWSEAAE TVRHMACGLA ALGLARGQNL AFISDNRPHV YMGFIAVQAL GGVPIPLYQD AVAAEMRFVI EDAEIDFAFA ENQEQVDKLL EVRESVSGLG HIIYDDPRGL RHYDQPGLIS TEALLQKGQE WDAAHPGAWD AMLAALSPDD VSVILYTSGT TGKPKGVCQT HRSFGESARG GVQVDRLGPG DNVISYLPPA WVGDHLFSFA QWLVAGFTIN CPESASTVSI DLREIGPSYY FAPPRIFEGM LTSVSIRMED AAPFKQWMYG RAMAVARRVG SDILDGKTVG TLDRLKYALG DLCIYGPLRN AMGLSRIRVA YTAGAAIGPE LFRFFRSIGI NLKQLYGQTE TCAYVCIQRD GQVELSSVGQ AAPGIELKIA DNGEVLLKGV SVLKEYYKRP DATAEVVDAD GWFHTGDAGV IDASGQLRII DRAKDVGKTS RGAMFAPNYI ENKLKFFPQI KEAVCFGHGR DQVCAFINID YEAVGNWAER QGLPYGGYVD LASKAKVLEM VADCVAQVNA DLAAEAGMAD TQVARFLVLH KELDPDDDEL TRTRKVRRGF IADKYGVLVD ALYTGKREQF IETQVKFEDG RTGSVSATLS IIDAKTHSVA ATARA
|
| |