| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_1157 |
|---|
| Symbol | |
|---|
| ID | 5746712 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | - |
|---|
| Start bp | 1286441 |
|---|
| End bp | 1287370 |
|---|
| Gene Length | 930 bp |
|---|
| Protein Length | 309 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641296237 |
|---|
| Product | inner-membrane translocator |
|---|
| Protein accession | YP_001562187 |
|---|
| Protein GI | 160896605 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 62 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGATTTT TTCTGGAAAC GCTGTTCGGC GGCCTCATGG TGGGCACGCT GTACGCGCTG
ATCGCCATCG GCTTCGTGCT GATCTTCAAG GCCTCGGGCG TGTTCAACTT CGCCCAGGGC
GCGATGGTGC TGTTCTCGGC CCTGGCCATG GCGCGCTTTT CCGAGTGGAT CCCGAAGTGG
ATCGGCATGG AGCCGGGCTG GTTCACCAAC CTGCTGGCCA TCTGCGTGTC GCTGGCCATC
ATGGTGGTAG TGGCCTGGGT GATCGAGCGG CTGGCGCTGC GCCACCTGGT CAACCAGGAG
CCCATCACGC TCTTGATGGC CACGCTGGGC ATCGCCTACC TGCTCGACGG CCTGGGCCCG
ATGATCTTCG GCAGCGCCGT CTACAGCATC AACGTGGGCA TGCCCAAGGA CCCCATGTTC
ATCCTCGAGG GCCTGTTCCA GGGCGGCGTG CTGCTCAGCC AGGAAGACCT GTACGCGGCC
TGCATCGCCG CGCTGCTGGT GGCCGCGCTC AGCGTGTTCT TCCAGAAGAC CAAGACCGGC
CGCGCGCTGC GCGCCGTGGC CGACGACCAC CAGGCGGCGC AGTCCATCGG CATCCCGCTG
TCGCGCATCT GGGTCATCGT CTGGTCGGTG GCCGGCGGCG TGGCCCTGGT GGTGGGCATC
ATCTGGGGCT CCAAGCTGGG CGTGCAGTAC TCGCTGTCGC TGGTGGCCCT GAAGGCCCTG
CCCGTGGTGA TCCTGGGCGG CCTGACCTCG CTGCCCGGCG CCATCATCGG CGGCCTGATC
ATCGGCGTGG GCGAGAAGCT CTCCGAGGTC TACCTCGGCC CCATGGTCGG CGGCGGCATC
GAGACCTGGT TCGCCTACGG CCTTGCCCTG TGCTTCCTGC TCGTGCGGCC CCAGGGGCTG
TTCGGCGACA AAATCATTGA TCGCGTTTGA
|
|---|
| Protein sequence | MGFFLETLFG GLMVGTLYAL IAIGFVLIFK ASGVFNFAQG AMVLFSALAM ARFSEWIPKW
IGMEPGWFTN LLAICVSLAI MVVVAWVIER LALRHLVNQE PITLLMATLG IAYLLDGLGP
MIFGSAVYSI NVGMPKDPMF ILEGLFQGGV LLSQEDLYAA CIAALLVAAL SVFFQKTKTG
RALRAVADDH QAAQSIGIPL SRIWVIVWSV AGGVALVVGI IWGSKLGVQY SLSLVALKAL
PVVILGGLTS LPGAIIGGLI IGVGEKLSEV YLGPMVGGGI ETWFAYGLAL CFLLVRPQGL
FGDKIIDRV
|
|---|
| |