| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_1145 |
|---|
| Symbol | |
|---|
| ID | 5746700 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | - |
|---|
| Start bp | 1274055 |
|---|
| End bp | 1275383 |
|---|
| Gene Length | 1329 bp |
|---|
| Protein Length | 442 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641296225 |
|---|
| Product | putative zinc protease protein |
|---|
| Protein accession | YP_001562175 |
|---|
| Protein GI | 160896593 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4324] Predicted aminopeptidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 51 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGACAA TGATCGCCAG CGTGAAGAAG TCCATGAAAG CAGCAAGGGG GCCAAGGGTG
CGAGAAGGCT TGAGTGTAGT CAGGCGCGGC CTGCCCGCGA TTTTGGTGGG CATAGGCCTG
CTGCTGGGCG GCTGTGCCAG CCGGGGGGCC GGTGGCGACG GGCTGGGCTA TTACTGGCAA
AGCCTGCGCG GGCAAATGCA CCTGCTGCAG GCCAGCCGCC CGATTGACGA CTGGCTGCAG
GACGAGAGCC TTGCGCCCGC ACTGCGCGAG CGCCTGCTGT CGGCCCGGCG CATGCGCGCC
TTTGCCGTGG AGCGCCTGGG CCTGCCCGAC AACGCCAGCT ACCGCCGCTA TGCCGATCTG
CAGCGGCCGT TTGCCGTATG GAACGTGGTG GCCGCGCCGC CCGACAGCCT GGAGCTGCAC
CGCTGGTGCT TTCCGGTGGC CGGCTGCGTA GGCTACCGGG GCTACTTTGC CGAGGCCGAC
GCCATGGCCC AGGCACGGCA ACTGGCCGAC CAGGGCCTGG AGTCCGGCAG CTACGGCGTG
CCCGCCTATT CCACGCTGGG CTACCTGAAC TGGCTGGGCG GCGATCCGCT GCTCAACACC
TTCATCGGCT GGGGCGAGGG GGAGTTCGCC GGCCTGCTGT TCCACGAACT GGCCCACCAG
GTGGTCTATG TGGCCGGCGA CACGGCCTTC AACGAATCCT TTGCCACCAC CGTGGAGCGC
CTGGGCACGC CGCTGTGGCT GGCCACCGAG GCCGGCCCCG CCGCCCGCGC ACGCTGGGAT
GCAGGCCAGC TGCGGCGCGC GCAGTGGCGG GCGCTGACCG GCCACACGCG CCAGGCGCTG
CAGCAGCTCT ACCAGGACCC GCAGCAGCGT GGCCCCGCCA TGGCGCAGGC CAAGGCGCAG
ATCTACCAGC AGTTCCGCAG CGACTACGCC GCGCTGCGCG CGCAATGGCG CAGCGCCGAT
GCGGCCCTGC TGACCACCGA TGCCCAGCGC CAGCTCTACG ACCGCAACCA GGCGCGGCTG
GACCAGTGGG TGGCCGATGC CAACAACGCC AGCTTTGGCG CGCTGGCCGC CTACGACGAC
TGGGTGCCGG CCTTCACCGC GCTGTGGAAG CAGTCGCAGA CCCAGGCGCC GGCCCAGGCC
GGCGGCGAGG CCACCCAGGG CTGGCAGCGC TTCTATGCCG AGGTAGAGAA ACTGGCCGCC
CTGCCTGCCT TGCAGCGCAA CACAAGGCTG TGCGGGCTCA TGCCCGCCGA TGCGTCCCTG
CCGCCTGCCT GCGCCCCGGA TCAGGACCGT GCGTCGGTCT CCACGCACGG GTCGCATCCC
GGCAACTGA
|
|---|
| Protein sequence | MKTMIASVKK SMKAARGPRV REGLSVVRRG LPAILVGIGL LLGGCASRGA GGDGLGYYWQ
SLRGQMHLLQ ASRPIDDWLQ DESLAPALRE RLLSARRMRA FAVERLGLPD NASYRRYADL
QRPFAVWNVV AAPPDSLELH RWCFPVAGCV GYRGYFAEAD AMAQARQLAD QGLESGSYGV
PAYSTLGYLN WLGGDPLLNT FIGWGEGEFA GLLFHELAHQ VVYVAGDTAF NESFATTVER
LGTPLWLATE AGPAARARWD AGQLRRAQWR ALTGHTRQAL QQLYQDPQQR GPAMAQAKAQ
IYQQFRSDYA ALRAQWRSAD AALLTTDAQR QLYDRNQARL DQWVADANNA SFGALAAYDD
WVPAFTALWK QSQTQAPAQA GGEATQGWQR FYAEVEKLAA LPALQRNTRL CGLMPADASL
PPACAPDQDR ASVSTHGSHP GN
|
|---|
| |