Gene Daci_1129 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1129 
Symbol 
ID5746684 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1255637 
End bp1257397 
Gene Length1761 bp 
Protein Length586 aa 
Translation table11 
GC content73% 
IMG OID641296209 
Producthypothetical protein 
Protein accessionYP_001562159 
Protein GI160896577 
COG category[R] General function prediction only 
COG ID[COG0661] Predicted unusual protein kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.755278 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCAAA CCGCCGTGGT CGCCGTGCGC GACCGTGCCC GGCTGCAGGA AATCGTCGGC 
GTGCTGCTGC GCTTCGGGCT GGCCGACCTG GTCGACACGC TGGGCCTGGC CCGCTTCGCG
CCGCGCGGCA GCCAGCCCCA TCCCGAGCAT CCGCTGGATG CCAGCCGCCC CGAGCGCCTG
CGCATGGCCC TCGAACACCT GGGGCCGAGC TTCGTCAAGC TGGGCCAGAT CATGGCCACG
CGCTCGGACC TGCTCGCGCC CGAATGGACG GCCGCCCTGC AGCAACTGCA CAGCCACGCC
GCCCCGCTGC CCTGGGAGAC GGCCCAGCCG TTGATCGAGC AGTCGCTGGG CCTGCCCGTG
GAGCAGGTGT TCACGCATTT CGACCCCGTG CCGCTGGCCT CGGCCTCCAT GGCCCAGGTG
TACCGCGCGC GGCTGCCTGC GGCTGAAGAC CGGGATGACC GGGATGACCG GGAAGACCAG
GAGGACGGCA GCGACAGCAC CCCTGCGGCC AGCGCTGCCG ACATCGAAGT CGTGGTCAAG
GTCCAGCGCC CCGGGCTGCG CCCCCAGATC GAGGCCGACC TGCGCCTGCT CGAGCACCTG
GCGCTGCTGG CCCAGGAACA ATGGCCGCAG CTGGCACGCT ACCGCCCGCG CGAAGTCACG
CGCCAGCTGG GCCAGGCGCT GCGCGAGGAA CTGGATTTCA CCGTCGAAGC CCACAACGGC
GACGCCGTGG CGCGGCACTT CGCGGCCCAG CCCGAGATCG TCGTGCCGAC CATCCACTGG
GCATTGAGCG GGCCGCGCCT GCTGGTGCAG GACTTCGTGC CGGGCGTGCC AGCCTCGGCC
GTGGGTGCGG ACCCCGCGCT GGACGGCCCG CTGCTGGCGC GCCGTGGCGC CTGCGCGTTT
TTGCAGATGG TGCTGCGCGA CGGCCTGTTC CACGCCGACC CGCACCCCGG CAACCTGCTG
GCCTTGCCCG GCAACCGCGT GGGCTTCATC GACTTCGGCA TGGTCGGGCG GCTGTCGCCC
CAGCGCCGCC GCCAGGTGCT GGGCCTGATG CGCGCCTTGG TCGAGGGCCA GGGCCGCAGC
CTCTCGGGCG TGCTGCTGGA ATGGGCGGCC GAAAGCGAAA TGCCCGGCCG CGCCCTGCCC
TCGGCCGCAC GCATCGAGGC CGCCGTGGAC CGCTTCGTGA CCCGCCATGG CCCCGGCGCC
AGCAACGGCC GCCTGGTCAT GTCCCGCGCG CTGCAGGACT TCATGGCCCT GGCCCGCGAA
ACCGGCGTGG CCCTGCCCGC CGACATGGCG CTGCTGCTCA AGGCCCTGAT CACGGCCGAC
CAGGTGCTGC TGCAGCTGGA CCCGCAATTC GACGTGGTGC AGACGGCCAC GCCCCTGGTC
AAGGCCCAGC TGCTGCAGCG CTACTCCCTG CGCAGCCTGG CGCGCCAGCG CCGCGCCGCC
ATGGCGCAGT GGCTGGAACT GGCCGACGAC GCGCCGCACA CCCTGCGGCT GGTGATGCAA
AGACTGCGCT CGGGCCGGCT GCAGGCCGAC CTGGACATAC GCCACATCGA CCGGCTTTCA
CTGGCACTGG AACGCGCCGC CACCCGCCTG GCCCTGGCCG TGGTCTCCGG CGCCTTCATC
CTGGGCCTGG CCCCCGGCCT GCTGACCATG GGCCCGCGCC TGTGGGGCAT CCCCCTCTTC
GCCGCCCTGG GCGTGGCCGG CGCCGCCGCC AGCCTGGCCG TTCTTTTCAC CACCATGCGC
AGGCAGAAGG CGCTGGATTG A
 
Protein sequence
MLQTAVVAVR DRARLQEIVG VLLRFGLADL VDTLGLARFA PRGSQPHPEH PLDASRPERL 
RMALEHLGPS FVKLGQIMAT RSDLLAPEWT AALQQLHSHA APLPWETAQP LIEQSLGLPV
EQVFTHFDPV PLASASMAQV YRARLPAAED RDDRDDREDQ EDGSDSTPAA SAADIEVVVK
VQRPGLRPQI EADLRLLEHL ALLAQEQWPQ LARYRPREVT RQLGQALREE LDFTVEAHNG
DAVARHFAAQ PEIVVPTIHW ALSGPRLLVQ DFVPGVPASA VGADPALDGP LLARRGACAF
LQMVLRDGLF HADPHPGNLL ALPGNRVGFI DFGMVGRLSP QRRRQVLGLM RALVEGQGRS
LSGVLLEWAA ESEMPGRALP SAARIEAAVD RFVTRHGPGA SNGRLVMSRA LQDFMALARE
TGVALPADMA LLLKALITAD QVLLQLDPQF DVVQTATPLV KAQLLQRYSL RSLARQRRAA
MAQWLELADD APHTLRLVMQ RLRSGRLQAD LDIRHIDRLS LALERAATRL ALAVVSGAFI
LGLAPGLLTM GPRLWGIPLF AALGVAGAAA SLAVLFTTMR RQKALD