| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_1108 |
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| Symbol | |
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| ID | 5746663 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 1228209 |
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| End bp | 1229669 |
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| Gene Length | 1461 bp |
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| Protein Length | 486 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641296188 |
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| Product | nitrite transporter |
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| Protein accession | YP_001562138 |
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| Protein GI | 160896556 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2223] Nitrate/nitrite transporter |
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| TIGRFAM ID | [TIGR00886] nitrite extrusion protein (nitrite facilitator) |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATGCGA ACACCAAGAC CGCCGCAAAG GCATCCGCGC GCAGCCGCCC CGGCAGCGTG
CTGACCCTCT GGCGCCCCGA GGACAGGCAG TTCTGGGAGC GCGAGGGCGA GGCCATCGCC
AGGATCAATC TCTGGATCTC GGTGCCCGCC CTGTTCCTGG CCTTTGCCAT CTGGCAGGTC
TGGAGCGTGG TGGCCGTGAA CCTGCCCGCG CTGGGCTTCA CCTACTCCAC CAACCAGCTG
TTCTGGCTGG CGGCCGCGCC CGCGCTGTCG GGCGCCACGC TGCGCATCTT CTATTCCTTC
ATGGTGCCGC TGATGGGCGG GCGCCGCTGG ACGGCGCTGT CCACGGCCTC GCTGCTGATC
CCGGCCATCG GCATCGGCTA CGCGGTGCAG GACGCCAGCA CCGGCTATCC GACCATGCTG
ATCCTGGCCC TGCTGTGCGG CCTGGGCGGG GGCAACTTCA GCTCCAGCAT GGCCAACATC
AGCTTCTTCT TTCCCAAGGA GCGCAAGGGC TCGGCCCTGG GCGTGAACGC GGGCCTGGGC
AACCTGGGCG TGTCGGTGGT GCAGTTCCTG AGCCCGCTGG TGATCACGGC CGGCATCTTC
GGCGTCTTCG GCGGCGATGC GCAGACCATC ACCAAGGCCG GCGAGACCAC CCGGGTGTGG
GCGCAGAACG CGGCCTTCAT CTGGGTGCCG TGGATCGCCA TCGCCTCGCT GGCCGCCTGG
TTCGGCATGA ACGACATCGC CGATGCCAAG GCCAGCTTCG CGGCCCAGGC CGCCATCTTC
CGGCGCAAGC ACAACTGGGT GATGTGCCTG CTGTACCTGG GCACCTTCGG CTCGTTCATC
GGCTTTGCCG CCGGCTTTCC GCTGCTGATC AAGAGCCAGT TCCCGGCGGT CAACCCGCTG
GCCTATGCCT GGCTGGGCCC GCTGCTGGGC GCGCTGTCGC GGCCCTTTGG CGGCTGGCTG
GCCGACAAGG CGGGCGGCGC GCGCGTGACG TTCTGGAACT TCCTCGTCAT GGCCGTGGCC
GTGGTGGGCG TGCTGTATTT CCTGCCCAAG GGCAGCGGCG GCTACGCGCT GGGCTTCGGC
CCTGCCGAGG GCAGCTTCAT GGGCTTCTTC CTGATGTTCC TGGTGCTGTT CCTGACCACG
GGCATCGGCA ACGGATCGAC CTTCAGCATG ATCCCGGCGA TTTTCCTGGC CCTCAAGCAG
CGCGAACTGG GCGCCCATCC CAGCGAGCAA GCGCAGGCCC ATGCCCTCAA GGAGGGCAAT
ACCGAAGGCG CGGCCGCCCT GGGCTTTGCG GGCGCGCTGG GAGCCTACGG CGGCTTCTTC
ATCCCCAAGA GCTACGGCAG CTCCATCGCC GCCACGGGCG GGCCCGAGCT GGCGCTGTGG
GTGTTTGCCG CCTTCTATGT GCTGTGCGTG GGCGTGACCT GGTGGTACTA CGCGCGCAGG
AACGCCGAGA TGCCCTGCTG A
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| Protein sequence | MHANTKTAAK ASARSRPGSV LTLWRPEDRQ FWEREGEAIA RINLWISVPA LFLAFAIWQV
WSVVAVNLPA LGFTYSTNQL FWLAAAPALS GATLRIFYSF MVPLMGGRRW TALSTASLLI
PAIGIGYAVQ DASTGYPTML ILALLCGLGG GNFSSSMANI SFFFPKERKG SALGVNAGLG
NLGVSVVQFL SPLVITAGIF GVFGGDAQTI TKAGETTRVW AQNAAFIWVP WIAIASLAAW
FGMNDIADAK ASFAAQAAIF RRKHNWVMCL LYLGTFGSFI GFAAGFPLLI KSQFPAVNPL
AYAWLGPLLG ALSRPFGGWL ADKAGGARVT FWNFLVMAVA VVGVLYFLPK GSGGYALGFG
PAEGSFMGFF LMFLVLFLTT GIGNGSTFSM IPAIFLALKQ RELGAHPSEQ AQAHALKEGN
TEGAAALGFA GALGAYGGFF IPKSYGSSIA ATGGPELALW VFAAFYVLCV GVTWWYYARR
NAEMPC
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