| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_1068 |
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| Symbol | |
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| ID | 5746623 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 1178270 |
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| End bp | 1179313 |
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| Gene Length | 1044 bp |
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| Protein Length | 347 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641296148 |
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| Product | twitching motility protein |
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| Protein accession | YP_001562098 |
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| Protein GI | 160896516 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2805] Tfp pilus assembly protein, pilus retraction ATPase PilT |
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| TIGRFAM ID | [TIGR01420] pilus retraction protein PilT |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.365161 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGACATCA CCCAATTGCT GGCATTCAGC GTCAAGAACA AGGCCTCCGA CCTGCACCTG
TCCGCGGGGC TGCCGCCGAT GATCCGTGTG CACGGCGATG TGCGCCGCAT CAATGTCGAT
CCGCTGGACC ACAAGACGGT CCACGCCATG GTCTACGACA TCATGAGCGA CTCCCAGCGC
AAGGCCTACG AGGAGTTCCT GGAGGTGGAC TTCTCGTTCG AGATCGAGGG GCTGGCGCGC
TTTCGTGTCA ACGCCTTCAA CCAGTACCGG GGCGCGGCCG CCGTCTTCCG GACCATTCCC
AGCAAGATCC TGACGCTGGA GCAGCTCAAC GCGCCACGCA TCTTCGGCGA CCTGGCCCTG
AAGCCGCGCG GCCTGGTGCT GGTGACCGGC CCCACGGGCT CGGGCAAGTC CACCACGCTG
GCCGGCATGG TCAACCACCT CAACGAGACC GAGTACGGGC ACATCCTGAC GGTGGAGGAC
CCCATCGAAT TCGTGCACGA CTCCAAGAAG TGCCTGATCA ACCAGCGTGA AGTCGGGCCG
ATGACGCAGT CGTTCTCGGC CGCCCTGCGC TCGGCGCTGC GCGAGGACCC GGACGCCATC
CTGGTGGGCG AAATGCGTGA CCTGGAAACC ATCCGCCTGG CCATGACCGC GGCCGAGACG
GGCCACCTGG TCTTCGGCAC CCTGCACACC TCCAGCGCCG CCAAGACCAT CGACCGCATC
ATCGACGTCT TCCCCGCCGA GGAAAAGGAG ATGGTGCGCG CCATGCTCTC CGAATCGCTG
CAGGCCGTGA TCTCGCAGAC GCTGTGCAAG ACCAAGGACG GCCAGGGCCG CATCGCGGCC
CACGAAATCA TGCTGGGCAC CAGCGCCATC CGCAACCTGA TACGCGAGGC CAAGGTGGCC
CAGATGTACT CCACCATCCA GACGAGTCAG AATGTGGGCA TGCAGACGCT GGACCAGAAC
CTGACCGATC TGGTGCGGCG CAACCTGATC AGCCCCGCGG AAGCCCGCGC CAAGGCCAAG
ATACCGGACA ACTTCCCGGG CTGA
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| Protein sequence | MDITQLLAFS VKNKASDLHL SAGLPPMIRV HGDVRRINVD PLDHKTVHAM VYDIMSDSQR
KAYEEFLEVD FSFEIEGLAR FRVNAFNQYR GAAAVFRTIP SKILTLEQLN APRIFGDLAL
KPRGLVLVTG PTGSGKSTTL AGMVNHLNET EYGHILTVED PIEFVHDSKK CLINQREVGP
MTQSFSAALR SALREDPDAI LVGEMRDLET IRLAMTAAET GHLVFGTLHT SSAAKTIDRI
IDVFPAEEKE MVRAMLSESL QAVISQTLCK TKDGQGRIAA HEIMLGTSAI RNLIREAKVA
QMYSTIQTSQ NVGMQTLDQN LTDLVRRNLI SPAEARAKAK IPDNFPG
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