| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_1064 |
|---|
| Symbol | |
|---|
| ID | 5746619 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | + |
|---|
| Start bp | 1174380 |
|---|
| End bp | 1175111 |
|---|
| Gene Length | 732 bp |
|---|
| Protein Length | 243 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641296144 |
|---|
| Product | transport-associated protein |
|---|
| Protein accession | YP_001562094 |
|---|
| Protein GI | 160896512 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2823] Predicted periplasmic or secreted lipoprotein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 0.21469 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGTTCC GTTGGTCCCG CGCCGCCTGC GCCGTGCTCG CCGTCGCGTC CCTGGGCGCC
GCCCTGTCGG GCTGCGTCGC CCTGGTGGGC GGCAGCGCCG TGATGGCCGG CATGTCGGTG
GCGGACCGCC GCACCACCGG CACCCAGGTG GAAGACCAGG GCATCGAGTT GCGCGCCAAC
AACCGCATCG CCGAAGTGCT GGGCGACAAG GCCCATGTCA ACGTCACCAG CTACAACCGC
CAGGTGCTGC TGACCGGCGA GGCCGGCAAT GAGGCCGACC GCCAGACCAT CGAGAAGCTC
GTGCGCGAGC AGCCCACGGT GCGCAATGTC TTCAACGAAG TGGTGGTGGC TCCCTTCACC
TCCACGCTGA GCCAGCGCTC CAAGGACACG CTGATCACCA CCCAGGTCAA GGCCAGCCTG
CTGGACGCCA AGGACATCCA GGCCTCGGCC TTCAAGGTCG TGACCGAGAA CAAGGTCGTC
TTCCTGATGG GCATCGTCAC CCCGCGCGAA GCCAAGCGCG GCGCCGAGAT TGCACGCGGC
ATCAACGACG TGACCAAGGT CGTGCGCGTG GTGGAAGTCA TCTCCGAGGA CGAACTGGCC
CGCATGCAGC CCCAGTCCGC CCCCGTGGTC ACCGACGACT CCGGCAAGGC CGCCGCAGCC
AGCGCTCCCA CCAGCCTCTC GGAAAGCAGC CTGTCCACCC CCGCAGGCGC CACCGCCACC
CCGGTGAAGT GA
|
|---|
| Protein sequence | MKFRWSRAAC AVLAVASLGA ALSGCVALVG GSAVMAGMSV ADRRTTGTQV EDQGIELRAN
NRIAEVLGDK AHVNVTSYNR QVLLTGEAGN EADRQTIEKL VREQPTVRNV FNEVVVAPFT
STLSQRSKDT LITTQVKASL LDAKDIQASA FKVVTENKVV FLMGIVTPRE AKRGAEIARG
INDVTKVVRV VEVISEDELA RMQPQSAPVV TDDSGKAAAA SAPTSLSESS LSTPAGATAT
PVK
|
|---|
| |