| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_1056 |
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| Symbol | |
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| ID | 5746611 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 1166542 |
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| End bp | 1167489 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641296136 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001562086 |
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| Protein GI | 160896504 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.586464 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCGCC GCTATCTGCT CAGCCGCATC GCCCAGGCCG CCCTGGTGCT GTGGGCGGCC
TTCACGGTCT CGTTCATCCT GCTGCAGCTG CTGCCGGGCG ATGCCGTGCT GATCAAGTTC
CTGAACCCCG AGCTGGGCCT GGGCCCGCAG GAGATTGCCG ACATCCGCGC CGCCTACGGC
TCGGACCAGC CCGTGTGGCA GCAGTACCTG CACACGCTGG GCCAGTTCCT CACGGGCCAT
TTCGGCTATT CGCTGCAGGC CGGCGTGCCG GTGAGCCAGG GCCTGGCCAC TAGCCTGCCG
CCCACGCTCA AGCTCGCGGC CCTGGGCTTT GCCGCAGCCG CGCTGCTGGC CGTGGCGCTG
GCGGCGGCTG CCAGCCTGGC GCCCTTTGCC TGGCTGCGCA ACGCGCTGTA TTCGCTGCCT
TCGGTCTTTG TCTCGGTGCC CGTGTTCTGG CTGGGGATCA TGCTGATCCA GGTGGTGTCG
TTCCGCCTGG GCTGGATCGC CGTGATCAAT CCCGGCCCCT GGGAAGGACT GGTGCTGCCC
ACGCTGACCC TGGCCGTGCC GATCTCGGCG CCGCTGGCCC AGGTGCTGCT GCGCAATATC
GACGCCGTGC TGGCCCAGCC CTTCGTGGCC GTGGCGCGGG CCAAGGGCGC CTCGCGCCGC
TGGGTGCTGC TGCGCCATGT GGCACGCAAT GCCCTGCTGC CCACGCTGAC CATTGCCGGC
GTGCTGTTCG GCGAGCTGCT GGCCGGCGCC GTGGTGACGG AGGCCGTGTT CGGCCTCAAC
GGCCTGGGCA CGCTGACCCA GCAGGCCGTG GGCAACCAGG ACACGGCCGT GCTCCAGGCC
GTGGTGGTCG TCTCGGCCGC CGCCTTCGTA CTCATCAACC TCGCCGTGGA CCTGCTGTAC
CCGCTGCTTG ATCCGCGCCT GCGCCATTCC GTGGAGAACC GGCCATGA
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| Protein sequence | MPRRYLLSRI AQAALVLWAA FTVSFILLQL LPGDAVLIKF LNPELGLGPQ EIADIRAAYG
SDQPVWQQYL HTLGQFLTGH FGYSLQAGVP VSQGLATSLP PTLKLAALGF AAAALLAVAL
AAAASLAPFA WLRNALYSLP SVFVSVPVFW LGIMLIQVVS FRLGWIAVIN PGPWEGLVLP
TLTLAVPISA PLAQVLLRNI DAVLAQPFVA VARAKGASRR WVLLRHVARN ALLPTLTIAG
VLFGELLAGA VVTEAVFGLN GLGTLTQQAV GNQDTAVLQA VVVVSAAAFV LINLAVDLLY
PLLDPRLRHS VENRP
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