| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_1054 |
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| Symbol | |
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| ID | 5746609 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 1163901 |
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| End bp | 1165592 |
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| Gene Length | 1692 bp |
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| Protein Length | 563 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641296134 |
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| Product | ABC transporter related |
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| Protein accession | YP_001562084 |
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| Protein GI | 160896502 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase |
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| TIGRFAM ID | [TIGR02323] phosphonate C-P lyase system protein PhnK |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.763117 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCCG CCATCGAGGA GCGCATCCAC GCCGCACCAG CGGTGGCAAC GACCGCCCCC
GTGCTCGAAG TGCAGGACCT GGCCGTGGCC TACCGCGATG CCGCAGGCCA GGCGCAGCGC
GTGGTGCACG GCGTGTCGTT TTCCGTGGCG CCGGGCGAGG TGGTGGCCCT GGTCGGCGAA
TCGGGCTCGG GCAAGACCAC CACGGCCCAG GCCGTGATCG GCCTTTTGGC CGACAACGGC
CACCGCGAGC ACGGCAGCAT CCGCCTGCAG GGCACCGAGG TCTCGGGCTG GCCGGCCGCA
CGCTGGAACG CCATCCGCGG CCGCGTGGTC AGCCTGGTGC CGCAGGACCC CACCATGTCG
CTGAACCCCG TGCGCACGGT AGGCGACCAG GTGGGCGAGA TCCTGCGCAT CCACGGCCTG
CGCGACCGCA CGGCCGTGGA GGCGCGCGTG CTGGAGCTGC TGGACCGCGT GGGGCTGTCC
CAGCCCGCGC TGCGCGCACG CCAGTATCCG CACGAGCTGT CGGGCGGCAT GCGCCAGCGC
GTGCTGATCG CCATCGCCAT CGCGCTGCGG CCCGCCCTCA TCATTGCCGA CGAGCCCACC
AGCGCGCTGG ACGTGACCGT GCAGCGGCGC ATCCTGGACC TGATCGACGC GCTGCGCCGC
GAGACCGGCA CGGCCGTGCT GCTGGTCACG CATGACCTGG GCGTGGCGGC CGACCGTTCA
CACCGCCTGG TCGTCATGCA GGGCGGCCGC ATCCAGGAGC AGGGCCCCAC GCTGGAGCTG
CTGCGCAATC CGCAAAGCGC CTATACGCGG CGGCTGCTGG CCGATGCGCC TTCCCTGGCG
CCCGCACCGC GCCGCACGCC CAGGCCCGCC ACGGCCGATG ACTGGGCCAT CGAGGTCGAG
GACCTGGTGC ACGAGTTCGC GGCGCCCGGC CATGCCTCGG CCCACGGGCG CGGCATCTTC
CGTGCCGTGG ACGGCGTGTC GCTGCGCGTG CGCCGGGGCA GCACGCATGC CATCGTGGGC
GAGTCGGGCT CGGGCAAGAC CACCACCATC CGCGCCATCG TGGGCCTGGG CCGGCCCACG
GCGGGCCGCA TCCGCATCGA AGGCACCGAG GTCACGGGCC TGCGCGGCGA GGCCCTGCGC
CAGCTGCGCC GCCGCGTGCA GCTGGTCTAC CAGAACCCGT TCAGTTCTCT GGACCCGCGC
CAGAGCGTGT TCGACATCAT CGAGGAGCCC CTGCTGAACT TCGACCCGCT GCCGGCCGAT
GAGCGCCGCC AGCGCGTGCA CGACATGCTG GAGCGCGTGG GCCTGCCTGC CGCCGTGCTG
CAGCGGCGCC CGCATGCGCT GTCGGGCGGC CAGCGCCAGC GCGTGGCGAT TGCGCGCGCC
CTGGTGCTGC AGCCGCAGGT GCTGGTGCTG GACGAGGCCG TATCGGCCCT GGACGTGACG
GTGCAGGCGC AGATCCTGGC CCTGCTCGCC CAGCTGCAGC AGGACCTGGG GCTGACCTAT
CTCTTCATCT CGCACGACCT TGCCGTGGTG CGCCAGATCG CCGACACGGT GTCGGTGCTG
CGCGCGGGCC GGGTGGTGGA CGCGGGCAGC GTGGAGGAAG TGTTCCAGCG CCCGACCAGC
GACTACACGC GCGAACTCAT GGACGCCATT CCCGGCAAAA GGAGCATTGA TTTTGTCCCT
CATACCGCCT GA
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| Protein sequence | MSAAIEERIH AAPAVATTAP VLEVQDLAVA YRDAAGQAQR VVHGVSFSVA PGEVVALVGE
SGSGKTTTAQ AVIGLLADNG HREHGSIRLQ GTEVSGWPAA RWNAIRGRVV SLVPQDPTMS
LNPVRTVGDQ VGEILRIHGL RDRTAVEARV LELLDRVGLS QPALRARQYP HELSGGMRQR
VLIAIAIALR PALIIADEPT SALDVTVQRR ILDLIDALRR ETGTAVLLVT HDLGVAADRS
HRLVVMQGGR IQEQGPTLEL LRNPQSAYTR RLLADAPSLA PAPRRTPRPA TADDWAIEVE
DLVHEFAAPG HASAHGRGIF RAVDGVSLRV RRGSTHAIVG ESGSGKTTTI RAIVGLGRPT
AGRIRIEGTE VTGLRGEALR QLRRRVQLVY QNPFSSLDPR QSVFDIIEEP LLNFDPLPAD
ERRQRVHDML ERVGLPAAVL QRRPHALSGG QRQRVAIARA LVLQPQVLVL DEAVSALDVT
VQAQILALLA QLQQDLGLTY LFISHDLAVV RQIADTVSVL RAGRVVDAGS VEEVFQRPTS
DYTRELMDAI PGKRSIDFVP HTA
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