Gene Daci_1045 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1045 
Symbol 
ID5746599 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1156395 
End bp1156799 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content61% 
IMG OID641296124 
Product30S ribosomal protein S11 
Protein accessionYP_001562075 
Protein GI160896493 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0100] Ribosomal protein S11 
TIGRFAM ID[TIGR03632] 30S ribosomal protein S11 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTAAGT CTCCCGCAAA CAACGCTGCA CAGCGCGTTC GCAAGAAAGT CCGTAAGAAC 
ATTTCGGACG GCATTGCCCA CGTGCACGCT TCGTTCAACA ACACGATCAT CACCATCACC
GACCGCCAAG GCAACGCTCT GTCGTGGGCC TCGTCGGGTG GCCAGGGCTT CAAGGGTTCG
CGCAAGTCGA CTCCCTTCGC TGCCCAGGTG GCTTCGGAAG TGGCTGGTCG TGCTGCCATC
GAACAGGGCA TCAAGAACCT GGACGTCGAA ATCAAGGGTC CCGGTCCTGG CCGTGAATCC
TCGGTTCGCG CCCTGGGCGC CCTGGGCATC CGCATCACTT CCATCGCGGA CGTGACGCCG
GTTCCCCACA ACGGCTGCCG CCCTCAAAAG CGCCGTCGTA TCTAA
 
Protein sequence
MAKSPANNAA QRVRKKVRKN ISDGIAHVHA SFNNTIITIT DRQGNALSWA SSGGQGFKGS 
RKSTPFAAQV ASEVAGRAAI EQGIKNLDVE IKGPGPGRES SVRALGALGI RITSIADVTP
VPHNGCRPQK RRRI