Gene Daci_1041 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1041 
SymbolrplO 
ID5746595 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1153967 
End bp1154398 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content61% 
IMG OID641296121 
Product50S ribosomal protein L15 
Protein accessionYP_001562072 
Protein GI160896490 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0200] Ribosomal protein L15 
TIGRFAM ID[TIGR01071] ribosomal protein L15, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.140448 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACTCA ATAGCATCAA GCCTGCAGAG GGCTCCAAGC ACGCCAAGCG CCGTGTCGGT 
CGCGGCATCG GCTCCGGCCT GGGCAAGACT GCCGGCCGTG GTCACAAGGG TCAGAAGTCG
CGTTCGGGTG GCTACCACAA GGTGGGCTTC GAAGGCGGTC AAATGCCTCT GCAGCGCCGT
CTGCCCAAGC GTGGCTTCAA GTCGCATCTG CTGAAGTTCA ATGCAGAAGT GACCCTGTCC
GCTCTGGAAC AGCTGGGCCT GGCCGAAGTC GATCTGGCAG CTCTGAAGCA AGCCGGTCTG
GTTGGTGAAA TCGCAAAGGT GGTCAAGATC ATCAAGAGCG GTGAAATCAG CAAGGCTGTC
AAGCTCAACG GCATCGGCGC TACCGCCGGC GCCAAGGCTG CCATCGAAGC TGCCGGTGGC
AGCATCGCCT GA
 
Protein sequence
MELNSIKPAE GSKHAKRRVG RGIGSGLGKT AGRGHKGQKS RSGGYHKVGF EGGQMPLQRR 
LPKRGFKSHL LKFNAEVTLS ALEQLGLAEV DLAALKQAGL VGEIAKVVKI IKSGEISKAV
KLNGIGATAG AKAAIEAAGG SIA