| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_1037 |
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| Symbol | rplF |
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| ID | 5746591 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 1152311 |
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| End bp | 1152844 |
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| Gene Length | 534 bp |
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| Protein Length | 177 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641296117 |
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| Product | 50S ribosomal protein L6 |
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| Protein accession | YP_001562068 |
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| Protein GI | 160896486 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0097] Ribosomal protein L6P/L9E |
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| TIGRFAM ID | [TIGR03654] ribosomal protein L6, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00000958163 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCTCGCG TAGCAAAGAC TCCCGTGGCC ATCCCCGCAG GCGTGGATGT GTCCATCAAA
GACGACCAGA TCAATGTGAA GGGCACCGGC GGCGCGCTGT CGCAAGCCCA GAACGCTCTG
GTGAAGATCT CCAACAACGA AGGCAAGCTG TCTTTCGAGC CCGTCAATGA CTCGCGCGAA
GCCAACGCCA TGAGCGGCAC CATGCGTCAG CTGGTGAACA ACATGGTGGT GGGCGTGAGC
AAGGGCTTCG AGAAGAAGCT GTCGCTGGTT GGCGTGGGTT TCAAGGCTTC GGCCTCGGGC
TCCAAGCTGA ACCTGGCGAT CGGCTTTTCG CACCCGGTGA ACTTCGAAAT GCCGGCCGGC
ATCACTGTCA CCACCCCCAC ACCGACCGAA ATCTTGGTCA AGGGTGCTGA CCGCCAGGCC
GTTGGCCAAA TGGCTGCTGA GATCCGTGCC GTTCGTCCTC CCGAGCCCTA CAAGGGCAAG
GGCATCCGTT ACTCGGATGA GAAGGTCGTG ATCAAAGAGA CCAAGAAGAA GTAA
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| Protein sequence | MSRVAKTPVA IPAGVDVSIK DDQINVKGTG GALSQAQNAL VKISNNEGKL SFEPVNDSRE
ANAMSGTMRQ LVNNMVVGVS KGFEKKLSLV GVGFKASASG SKLNLAIGFS HPVNFEMPAG
ITVTTPTPTE ILVKGADRQA VGQMAAEIRA VRPPEPYKGK GIRYSDEKVV IKETKKK
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