Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_1030 |
Symbol | |
ID | 5746584 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | + |
Start bp | 1145951 |
End bp | 1147684 |
Gene Length | 1734 bp |
Protein Length | 577 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641296110 |
Product | extracellular solute-binding protein |
Protein accession | YP_001562061 |
Protein GI | 160896479 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACAAC GACTTCATAC CATCGCCCTC GCGGCGGCCC TGCTGGCGGC GGGGCAGGCG TCCTGGGCCG GAGAGGCGGA AGCCAAGAAG TGGATCGACG CGGAGTTCCA GCCCAGCACG CTGTCCAAGG ACCAGCAGAT GGCCGAGATG AAGTGGTTCA TCGAGGCGGC CAAGAAGCTG CAGGCCAAGG GCGTCAAGGA GATCGCCGTG GTGTCCGAGA CCATCACCAC GCACGAGTAC GAGAGCAAGA CGCTGGCCAA GGCCTTCACC GAGATCACGG GCATCACCGT CAAGCACGAC CTGATCCAGG AAGGCGACGT GGTCGAGAAG CTGCAGACCT CGATGCAGTC GGGCAAGTCC ATCTATGACG GCTGGATCTC CGACTCCGAC CTGATCGGCA CGCACTACCG CTACGGCCGC ATCATGAGCC TGACCGACTA CATGGCCGGC GCCGGCAAGG ACTTCACCAA TCCGGGCCTG GACATCAAGG ACTTCATCGG CACCAGCTTC ACCACCGCGC CCGACGGCAA GCTCTACCAG CTGCCCGACC AGCAGTTCGC CAACCTCTAC TGGTTCCGCG CCGACCTCTT CGAGCGCAAG GACCTCAAGG ACAAGTTCAA GGCCAAGTAC GGCTACGAGC TGGGCGTGCC GCTGAACTGG AGCGCCTACG AGGACATCGC CGAGTTCTTC ACCAACGACG TCAAGCAGAT CGACGGCAAG CCCATCTACG GCCACATGGA CTACGGCAAG AAGGACCCGT CGCTGGGCTG GCGCTTCACC GATGCCTGGC TGTCCATGGC CGGCGCGGCC GACAAGGGCA TTCCCAACGG CATGCCCGTC GATGAATGGG GCATCCGCGT GGCCGACGAC AAGTGCACGC CCGTGGGCGC CTCGGTCTCG CGCGGGGGCG CCACCAACTC GCCGGCCGCC GTGTTCGCGC TCACCAAGTA CGTGGACTGG ATGAAGAAAT ACGCGCCCAA GGAAGCCATG GGCATGACCT TCGGCGAGTC CGGCCCCGTG CCGGCCCAGG GCCATATCGC GCAGCAGATC TTCTGGTACA CCGCCTTCAC GGCCGACATG ACCAAGCCCG GCCTGCCCGT GGTCAATGCC GACGGCACGC CCAAATGGCG CATGGCGCCC GGCCCCAACG GCCCCTACTG GAAGGACGGC ATGCAAAACG GCTACCAGGA CGTGGGCAGC TGGACCTTCT TCAAGGACCA TGACGCCAAC CGCACGGCCG CCGCCTGGCT CTACGCGCAG TTCGTCACCG CCAAGACCAC CAGCCTCAAG AAGACCATCG TCGGCCTGAC GCCCATCCGC GAAAGCGACA TCCGCTCCAA GGCCATGACC GACATGGCGC CCAAGCTCGG CGGCCTGGTC GAGTTCTACC GCAGCCCCGC CCGCGTGGCC TGGACGCCCA CCGGCAACAA CGTGCCCGAC TACCCCAAGC TGGCCCAGCT GTGGTGGAAG AACGTGGCCC AGGCCGTCAC CGGCGAGAAG ACGCCCCAGG GCGCCATGGA CAACCTGGCC GAGGAAATGG ACCAGGTCAT GTCCCGCCTG CAGCGTGCCG GCATGGCGCA CTGCGCGCCC AAGCTCAACC CCAAGGGCGA CCCGGCCAAG TGGCTCAGCG ACAAGCAGGC GCCATGGAAG AAGCTGGCCA ATGAAAAGCC CAAGGGCGAG ACGATTGCGT ATGACACGCT GCTCAATGCC TGGAAAAACG GCAAGGTGCG TTAG
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Protein sequence | MKQRLHTIAL AAALLAAGQA SWAGEAEAKK WIDAEFQPST LSKDQQMAEM KWFIEAAKKL QAKGVKEIAV VSETITTHEY ESKTLAKAFT EITGITVKHD LIQEGDVVEK LQTSMQSGKS IYDGWISDSD LIGTHYRYGR IMSLTDYMAG AGKDFTNPGL DIKDFIGTSF TTAPDGKLYQ LPDQQFANLY WFRADLFERK DLKDKFKAKY GYELGVPLNW SAYEDIAEFF TNDVKQIDGK PIYGHMDYGK KDPSLGWRFT DAWLSMAGAA DKGIPNGMPV DEWGIRVADD KCTPVGASVS RGGATNSPAA VFALTKYVDW MKKYAPKEAM GMTFGESGPV PAQGHIAQQI FWYTAFTADM TKPGLPVVNA DGTPKWRMAP GPNGPYWKDG MQNGYQDVGS WTFFKDHDAN RTAAAWLYAQ FVTAKTTSLK KTIVGLTPIR ESDIRSKAMT DMAPKLGGLV EFYRSPARVA WTPTGNNVPD YPKLAQLWWK NVAQAVTGEK TPQGAMDNLA EEMDQVMSRL QRAGMAHCAP KLNPKGDPAK WLSDKQAPWK KLANEKPKGE TIAYDTLLNA WKNGKVR
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