Gene Daci_0957 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0957 
Symbol 
ID5746511 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1067493 
End bp1068380 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content70% 
IMG OID641296037 
ProductIclR family transcriptional regulator 
Protein accessionYP_001561988 
Protein GI160896406 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACA CCACCCCTTC CGGGAATGCC GAGAGCGCCG AGAGCGCGGA CAACGGCGCC 
GACAAGTACA TGGTGCCCGC GCTGGAGCGC GGCCTGCGCC TGCTGCAGGA GTTCGGGCGC
GGCAATGCCA CGCTGGGCGC GCCCGAGCTG GCCCGCCGCC TGCAACTGCC GCGCGCCACG
ATTTTCCGCA TGCTCAACAC GCTGGAGGCC ATGGGCTTTC TGCAGCGTGC CGAGGGCAGC
AATGACTACC GGCTGGGCCT GTCCGTGCTG CGCCTGGGCT TCGAGTTCCT GTCGTCCATG
GACCTGACCG AGCTGGGCCA GCCCGTGATC GCGCGGCTGT GCGGCGAGAT CCGCTATCCC
TGCAACATCG TGGTGCGCGA TGGCCGCTCC ATCGTCTACG TGGCCAAGGT GACGCCGCCC
ACGCCGCTGA CCAGTTCGGT GCGCGTGGGC ACGCGCCTGC CTGCCCATGC CACGGCCCTG
GGCCGCGTGC TGCTGGCCGA CCTGTCCCTG TCCGAGCTGC GCACGCTCTA CCCCGAGGAG
CACCTGGAAG CGCACACCCC CAAGACGCCG CGCACGGTGC TGGACCTGTT CAACCTGGTC
GAGGCCGACC GCGAGCGCGG CCATGTGTTC AGCGAAGGCT TCTACGAAAG TTCCATCTGC
ACCATCGCCG CCCCCGTGCG CGACCACAGC GGCCGCGTGG TGGCGGCGCT GGGCACGACG
GTTCCCGCGC CCCATGTGGA GGAGGGCCGT GCCGAGACCC TGATCGCCGG CGTCTGCGAC
GCGGCGGCCG AGCTGTCCGA GCTGCTGAAC TACCGCCCGC AAACGCAGAC GCAGACGGCA
CAGCTGCTTT CCCTCAATTC CCGGCGCGCA GGAGGCGGCC ATGTTTGA
 
Protein sequence
MTDTTPSGNA ESAESADNGA DKYMVPALER GLRLLQEFGR GNATLGAPEL ARRLQLPRAT 
IFRMLNTLEA MGFLQRAEGS NDYRLGLSVL RLGFEFLSSM DLTELGQPVI ARLCGEIRYP
CNIVVRDGRS IVYVAKVTPP TPLTSSVRVG TRLPAHATAL GRVLLADLSL SELRTLYPEE
HLEAHTPKTP RTVLDLFNLV EADRERGHVF SEGFYESSIC TIAAPVRDHS GRVVAALGTT
VPAPHVEEGR AETLIAGVCD AAAELSELLN YRPQTQTQTA QLLSLNSRRA GGGHV