Gene Daci_0923 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0923 
Symbol 
ID5746477 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1033065 
End bp1033382 
Gene Length318 bp 
Protein Length105 aa 
Translation table11 
GC content65% 
IMG OID641296003 
Producttranscriptional regulator, TrmB 
Protein accessionYP_001561954 
Protein GI160896372 
COG category[K] Transcription 
COG ID[COG0640] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAAC CGACGCTCTC TCCTGAACAG GCCTTTTTGC AGCAGGGCGC TGCACGTGCC 
GCCGCGCTGT TGCGCGCCGT GGGCAACGAG AGGCGCCTGC TGGTGCTGTG CCTGCTGATC
GAACATGGCG AGCTGTCCGT GGGCGAATTG CTGCAGCAGA TCCCGCTGAG CCAGTCGGCC
CTGTCCCAGC ACCTGGCCCG CATGCGCGAA GAGGGTCTGG TCGCCTACCG CCGCGAGTCG
CAGACGCTGT ACTACCGCAT CGCCAATCCC GATGTGCAAA AGCTGGTGGC CACGCTCAAG
AGCATCTTCT GCGCCTGA
 
Protein sequence
MTEPTLSPEQ AFLQQGAARA AALLRAVGNE RRLLVLCLLI EHGELSVGEL LQQIPLSQSA 
LSQHLARMRE EGLVAYRRES QTLYYRIANP DVQKLVATLK SIFCA