| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_0887 |
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| Symbol | |
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| ID | 5746441 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 996639 |
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| End bp | 999164 |
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| Gene Length | 2526 bp |
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| Protein Length | 841 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641295967 |
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| Product | peptidoglycan glycosyltransferase |
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| Protein accession | YP_001561918 |
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| Protein GI | 160896336 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG5009] Membrane carboxypeptidase/penicillin-binding protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.24195 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCTTTT CTTTCAATGA CTTGAAGCTG CCCGACGCTG TGCTCGCAGC CTGGCAAAGG
CTGCTGGCCA GCCGCATCGG CCAGCGCGTG GCGGCCCTGC CCTGGTGGCA CCGCTGGCCC
ACGCGGCGCG AATGGCTGCT GTTCGCCGCC GCGCTGCCGC TGCTGTTCGC GCTGTATGTG
CTGGCCCTGA TCCCGTTCAC GCCCGGCATC CGCGACATAC GCAAGGCCAA GCTGGAGCAG
CCCGCCCAGA TCATGAGCGC GGATGGCAAG CCGCTCGCGC AGTTCAAGCG CAGCAACCGG
CAATGGGTGA AGCTCGACGA GATGTCGCCC TCGGTGATCA AGGCGCTGAT CGCCACGGAG
GACCACCGCT TCTACGAGCA CCACGGCATG GACTGGCGGC GCACGCTGGG CTCGGTGGTG
CACACGCTGC GCGGCGATCC GCAGGGCGGC TCCACCCTCA CCCAGCAACT CGCACGCAAC
CTGTACCCGA CCGAGATCGG CCGCGCGCCC ACGCTCAACC GCAAGCTCAA GGAGGCGATC
ACGGCCTTCA AGATCGAGGC GCTCTACACC AAGGACGAGA TCCTCGAGAC CTATCTGAAC
ACCGTGCCCT TCCTCTACAA CGCCTTCGGC ATAGAGATGG CGGCGCGCAC CTATTTCGAC
AAACCGGCCG CGCGGCTGAC GGTGCTGGAA AGCGCCACGC TGGTGGGCAT GCTCAAGGGC
ACGAGCTACT ACAACCCCGT GCTCAACCCC GACCGCGCGC TGTACCGCCG CAACACGGTG
CTGTCGCAAA TGGTCAAGCG CGGCGTGCTG CAGGAGGCCG AGTTCGCCCA GCTCAAGAAG
CGCCCCATGC GCATCAACTT CGAGCGCCAG GAAGAGCCCC TGGGCATGGC CCCCCACTTC
GCGCAGCAAC TGCGCAAATG GCTGATCGAC TGGGCCGACC GCAACGACTA CAACATCTAC
ACCGACGGCT TGGTGGTGCA CACCACCATC GACTCGCGCC TGCAGAACTG GGCCAACCAG
GCCGTGGCGC GCCAGACGCG CACGCTGCAA GGCGTGGCCA ATGGCGCCTG GAGCCAGCGC
GACGGCTGGA ATGCCGCCAA CCCGCTGGTG CAACAACTGG TGCGAGAGAC CCCCGCCTGG
CGTGCCGCGC GCAAACGCGC GGACGGCCAA GGCAAGGACA AGGCAACGGA CAAGGACAGC
GAGGAAGACA CCCTCAAGGC CCTGCTGGCC GACAAGGCCT TCATGAAGCA GCTGCGCGAG
GACAAGACCC GCGTGCAGGC AGGCTTTGTG GCGCTGAACC CGGCCACCTC CGAAGTGCTG
GCCTGGGTGG GCAGCCGCGA CTTCACGCAG GACGCCTACG ACCACGTGCA GCAGGCACGG
CGACAGCCCG GATCCACCTT CAAGCCCTTT GTCTATGGCG CCGCGCTGCA GCAGGGCGCC
ACCCCCGACG ACAGGCGCGT GGACGGCCCC GTGGAAATCA AGCTGCCCGG CGGCGAAGTC
TGGCGCCCCA CCGACGCCAC GCCACCCACG GGCCGCGAGA TGACGCTGCG CGACGCCCTG
GCCTACTCCA AGAACACCAT CACCGCCGAA GTCATGCAGT CCGTGGGGCC CGCCCGCGTG
GCACGCCTGG CGCGCGCCCT GGGTGTGCGC CAGAGCCCGC TGGACGAAGT ACCCGCCCTG
GCCCTGGGCA GCAGCCCGGT GTCACTGCTG GAAATGGTCA ACGCCTATGC CAGCCTGGCC
CACGGCGGCC GCTGGCTGCC CCCCATGATG GTCACGCGCA TCGAGGACGC CGACGGCAAG
GTCATTGCCG AATTCAGCCC GCCCAAGCCC GAGCGCGCGC TGGACGAAGA CCACGCCTAC
GCCCTGGTGG ACATGCTGCG CTCCGTGGTG GACAAAGGCA CGGCCGTGGC CGTGCGCCAG
CGCTACGGCA TCCACGCCGA CGTGGCCGGC AAGACCGGCA CCACCCAGGG CAATGCCGAC
GGCTGGTTCA TCCTCATGCA CCCGGAAATC GTCACCGGCG CCTGGGCCGG CTTCAACGAC
CCGCGCATCA CCCTGCGCAG CGACCGCTGG GGCCAGGGCT CGCGCAGCGC CCTGCCCATG
GTGGGAGACT TCATGTCCCG CGCCCTGCGC AGCCCCGTCA TCGACGCCAA GGCCCGCTTC
GAGCCGCCCG AACAAAGCCA CTGGTGGTCC GACATGGTCG GCCGCCTGCG CGAACGCATG
CAGGGCTGGT GGCCTGACCA GCCGCCGCCC GCCCAGCCCG ACCAACCCGC CACCCCGGAG
CCGACTCCGG CCCCTGAACC CGCACCCGAG CCCACGGAGC CACCCGGCCC GGGCCTGTCG
CCCGGCGAGG AAATCATAGA AAGCACTCCC GCCCTGCCCG CCCCCAGCAT CCCCCTCACC
CAGGGCACGC TGGGCCCCAC GGACCAGCGC GCAGTGCAGG AAGCCACCCC CGCCACGCCC
GCCCTGCCCG GCGGCGAAGA CGCCCCCGCA GGCACCGGCG TGGTGATCAC GCCGATCCAG
CCCTGA
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| Protein sequence | MRFSFNDLKL PDAVLAAWQR LLASRIGQRV AALPWWHRWP TRREWLLFAA ALPLLFALYV
LALIPFTPGI RDIRKAKLEQ PAQIMSADGK PLAQFKRSNR QWVKLDEMSP SVIKALIATE
DHRFYEHHGM DWRRTLGSVV HTLRGDPQGG STLTQQLARN LYPTEIGRAP TLNRKLKEAI
TAFKIEALYT KDEILETYLN TVPFLYNAFG IEMAARTYFD KPAARLTVLE SATLVGMLKG
TSYYNPVLNP DRALYRRNTV LSQMVKRGVL QEAEFAQLKK RPMRINFERQ EEPLGMAPHF
AQQLRKWLID WADRNDYNIY TDGLVVHTTI DSRLQNWANQ AVARQTRTLQ GVANGAWSQR
DGWNAANPLV QQLVRETPAW RAARKRADGQ GKDKATDKDS EEDTLKALLA DKAFMKQLRE
DKTRVQAGFV ALNPATSEVL AWVGSRDFTQ DAYDHVQQAR RQPGSTFKPF VYGAALQQGA
TPDDRRVDGP VEIKLPGGEV WRPTDATPPT GREMTLRDAL AYSKNTITAE VMQSVGPARV
ARLARALGVR QSPLDEVPAL ALGSSPVSLL EMVNAYASLA HGGRWLPPMM VTRIEDADGK
VIAEFSPPKP ERALDEDHAY ALVDMLRSVV DKGTAVAVRQ RYGIHADVAG KTGTTQGNAD
GWFILMHPEI VTGAWAGFND PRITLRSDRW GQGSRSALPM VGDFMSRALR SPVIDAKARF
EPPEQSHWWS DMVGRLRERM QGWWPDQPPP AQPDQPATPE PTPAPEPAPE PTEPPGPGLS
PGEEIIESTP ALPAPSIPLT QGTLGPTDQR AVQEATPATP ALPGGEDAPA GTGVVITPIQ
P
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