| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_0864 |
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| Symbol | |
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| ID | 5746418 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 970388 |
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| End bp | 970879 |
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| Gene Length | 492 bp |
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| Protein Length | 163 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641295944 |
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| Product | pilin |
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| Protein accession | YP_001561895 |
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| Protein GI | 160896313 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4969] Tfp pilus assembly protein, major pilin PilA |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.484071 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCGTT CCATCCAGCA AGGTTTTACC TTGATCGAAT TGATGATCGT TGTGGCGATC
ATCGGCATTT TGGCAGCCGT TGCGCTGCCG GCTTATCAGG ACTACACAAC CCGCGCCAAG
GTTACTGAAG GTCTTTCCCT TGCTGCCGCC GCCAAAGTGG CCGTCGCTGA GAATGCGGCC
AATGGCAAGC CCTATAACGC CGGTTGGATG CCTCCTAACG CGACCAATAA CGTTGCTGGT
GTAACTATCG ATCAAGCAGC AGGATACATC ACGATCACTT ATCAAACTGG CATCGCCGGC
GCTGGCACGC TGATTCTCAA CCCAATTGAT GGCCCCAAGA CTAGCGGCAC TGCATTTTCC
GGCGGAACCT CAACCTCCTC GAACATTCCG ACCAGCGGTT CCATCAGCTG GAATTGCCGC
GCTGCTGGAT CTACTGGCGT CGGCACAGCC GGCACCATCC AAGCCAAGTA CACACCTGCT
GAATGCCGTT AA
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| Protein sequence | MKRSIQQGFT LIELMIVVAI IGILAAVALP AYQDYTTRAK VTEGLSLAAA AKVAVAENAA
NGKPYNAGWM PPNATNNVAG VTIDQAAGYI TITYQTGIAG AGTLILNPID GPKTSGTAFS
GGTSTSSNIP TSGSISWNCR AAGSTGVGTA GTIQAKYTPA ECR
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