| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_0863 |
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| Symbol | |
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| ID | 5746417 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 968239 |
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| End bp | 970182 |
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| Gene Length | 1944 bp |
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| Protein Length | 647 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641295943 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001561894 |
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| Protein GI | 160896312 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG3914] Predicted O-linked N-acetylglucosamine transferase, SPINDLY family |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.399235 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAA TTCTGGAATT TTTCCTTGGG AAATCTAGGA ATAAACAGAT TGTTGATCTG
GTTGGCTTGG ATCGCATAGA GTTGTCTCGA GACTTAAAAG TGCAGGCAAA CCAAGCTGTC
GCGCAAGGGC GCTGGGATGA GGCCGCACAG CTATATGAAA AGGCAATTTT GGCCAACTCA
GCAGACGCAT CTCTGTTGGT CGGCCTGGGT TTTAGCCATC TGCAGGCTGT AAGGCCAAAG
CAGGCACTGG CGACCTTGCT CCAGGCGATA CGAGTTTTGC CGAATAGCCA GGATGCCTGG
TTCTTGGCAG GAAAAGCACA GATTGCCCTG GGTCTGGAGG AGGATGCGGC GAAGAGTTGG
CGGAGACTAC TCGCAGTCAA TCCGGATTTT CTTCCGGTCT ATCCCGATAT CTTACAGCTG
CTTGTGCGTC TGGGATGTGC TCAAGAGGCT ATGGAAATTG CATTGAAGGC TGCAGAGCGT
GTGCCGGACT GTTTCGAATA TCAATTGTAC CATGCCAACC TCTTGGTCCA CGCTCATCAG
ACAGAAGCTG CAATCCCATA CTATTTACAG GCTCTCAAGA TTAATCCAAA TTCTGCAGAT
GTTCTCGCCA ATCTGGGAGT TGCTTGCCGC CAAAGCGGTG ATTTGGAAAG AGCGTTGAAT
TATTCGCGCC AAGCCATGCA GTTGAATTCC AGTGTGCCGG ATTTTTTTAG TAACTATCTT
TTTCTTTTGC AGTCGGCATC AGATGTCAGT GTTCAGGATA AATTTCTTGA ACACAGGCGC
TATGCGAAAA TTTTTGAGGA ACCCTATAAG AAGTTGTGGG CTTCTCACCA GAATCGACGT
GATCTATCGA AGGTCTTGAG AATAGGTTAT GTCTCGGGTG ATTTTTGCGA TCATGCCTTG
CGATTCTTTA TTGAGCCGGT ATTGAAAAAT CACAACCATG ACCGCTTTGA AATCCACTGC
TATTATACCA ATCGTATCGA TGATGAACAC ACGAAGAGGT TGCGGTCGTA CGCAGATCGT
TGGGTGGATT GCTGGAACTG GAATGATGAA CAACTGTTCA GTGATATTCA GGATCAGCAG
ATAGATATCT TGGTGGATCT TTCTGGGCAC ACGGCACACA ATCGCTTGCC CGTATTCGCT
AGAAAGCCTG CTCCTATACA GATGACGTGG CTGGGATACC AGTCGACCAC AGGCTTGACC
GCGATCGATT GGCGCATCAC GGACCATAGT CTGGATCCTG TGGGTATGAC GGAGCGATTC
AACAGTGAAC GTCTTCTGAG ACTACCTGCT GCTGGTGTTT TTGCGATAGA TGATAATTCT
CCCGTATTTC GTGAGCTCCC ATGCCTCACG GGTAAGCAAT TTACTTTCGG CTGCCTGCAC
AATCCTTCTA AAGTTACGAT GGAAGCTCTG GATGCTTGGG CCGAAATTCT TTTGCGAGCA
CCGGCTACAG TTTTGCTGAT GGGGAATTCG ACATCCCTAT ATGCTCAAAA AGTGCGTCAG
CGTATGGGGT GCAAAGGTGT TAGCTCTGAT CGTCTGATAT TTGTAGAGCG CTTATCCTTG
CAAGGATATC TTGCGCTGCA TCAACGTATC GATTTGATGC TCGATACCTT TCCCTACAAT
GGCGGGACCA CCACTTTACA TGCTATAGGT ATGGGCTTGC CGACTATTGT TCTTGGCAGT
GAAAGTGCCA TATCCCGTGT GGGGATGTCA ATAATGCAGG GGTATGGGCT GTCAGAGTTT
TGCTGTCTTG ATATTGAAGA CTATGTGGTA CGGGCTGTAG ACTGGAGCCA GAGGTGTGAG
GAATTGGCGA ATTTGCGTAA GATATTGCCA GAAAGAGTGG CTAAGCAGAA TGCAAGACTA
GCGCTTGAAT TTACGCAGGG GCTGGAAAAA GCTTGGCGGG ATATTTGGGA AGATTGGTGC
AGAACCTCTG GAGAAACGCG CTAG
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| Protein sequence | MKKILEFFLG KSRNKQIVDL VGLDRIELSR DLKVQANQAV AQGRWDEAAQ LYEKAILANS
ADASLLVGLG FSHLQAVRPK QALATLLQAI RVLPNSQDAW FLAGKAQIAL GLEEDAAKSW
RRLLAVNPDF LPVYPDILQL LVRLGCAQEA MEIALKAAER VPDCFEYQLY HANLLVHAHQ
TEAAIPYYLQ ALKINPNSAD VLANLGVACR QSGDLERALN YSRQAMQLNS SVPDFFSNYL
FLLQSASDVS VQDKFLEHRR YAKIFEEPYK KLWASHQNRR DLSKVLRIGY VSGDFCDHAL
RFFIEPVLKN HNHDRFEIHC YYTNRIDDEH TKRLRSYADR WVDCWNWNDE QLFSDIQDQQ
IDILVDLSGH TAHNRLPVFA RKPAPIQMTW LGYQSTTGLT AIDWRITDHS LDPVGMTERF
NSERLLRLPA AGVFAIDDNS PVFRELPCLT GKQFTFGCLH NPSKVTMEAL DAWAEILLRA
PATVLLMGNS TSLYAQKVRQ RMGCKGVSSD RLIFVERLSL QGYLALHQRI DLMLDTFPYN
GGTTTLHAIG MGLPTIVLGS ESAISRVGMS IMQGYGLSEF CCLDIEDYVV RAVDWSQRCE
ELANLRKILP ERVAKQNARL ALEFTQGLEK AWRDIWEDWC RTSGETR
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