| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_0837 |
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| Symbol | secF |
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| ID | 5746391 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 933256 |
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| End bp | 934206 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641295917 |
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| Product | preprotein translocase subunit SecF |
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| Protein accession | YP_001561868 |
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| Protein GI | 160896286 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0341] Preprotein translocase subunit SecF |
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| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR00966] protein-export membrane protein SecF |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGTTCT TCCGCATCCG CAAAGACATC CCCTTCATGA AGTACGCGTT GGTCCTCAAC
GCGATCTCCT TCATCACCTT CGCGCTGGCC GTGTTCTTCC TGCTCACGCG CGGCCTGCAC
CTGTCCGTGG AGTTCACGGG CGGCACCGTG ATGGAGGTGG CCTATACCCA GACCGCCGAC
ATCGCCAAGG TGCGCGATAC CGTCTCCAAG CTGGGCTACA GCGACGTCAC GGTGCAGAAC
TTCGGCACAT CGCGCGACGT GATGATCCGC CTGCCCGTGC AAAAGGACGT GTCCTCCGCG
CAGCAAAGCG AGCAGGTGCT CACGGCGCTC AAGAAGGAAG ACGCCGAAGT CACGCTGCGC
CGCACCGAGT TCGTGGGCCC GCAGGTGGGT GACGAACTCA TGCACAACGG CCTGATGGCC
CTGGGCTTCG TGGTGCTGGG CATCGTGATC TACCTGGCCA TGCGCTTCGA ATGGAAGTTC
GGCGTGGCCG CCGTGATCGC CAACCTGCAC GACGTGGTCA TCATCCTGGG CTTCTTCGCG
TTCTTCCAGT GGGAGTTCTC GCTGTCCGTG CTGGCCGGCG TGCTGGCCGT GCTGGGCTAC
TCGGTCAACG AGTCGGTCGT GATCTTCGAC CGTATCCGCG AAGCCTTCCG CAAGTTCCGC
AAGCTCAGCA CCACCGAGGT GATCGACCAC GCCATCACCA GCACGATGAG CCGCACCATC
ATCACCCACG CCTCCACCGA GGCCATGGTG CTGTCCATGT TCTTCTTCGG CGGTCCCAGC
CTGCACTACT TCGCGCTGGC GCTGACCATC GGCATCCTTT TCGGCATCTA TTCCTCGGTC
TTCGTGGCCG CCGCCATCGC CATGTGGCTG GGCGTCAAGC GCGAGGATCT GATCAAGGCG
CCCAAGGCTT CCACGGACCC CAACGATCCC AACGCTGGCG CCACCGTGTA A
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| Protein sequence | MEFFRIRKDI PFMKYALVLN AISFITFALA VFFLLTRGLH LSVEFTGGTV MEVAYTQTAD
IAKVRDTVSK LGYSDVTVQN FGTSRDVMIR LPVQKDVSSA QQSEQVLTAL KKEDAEVTLR
RTEFVGPQVG DELMHNGLMA LGFVVLGIVI YLAMRFEWKF GVAAVIANLH DVVIILGFFA
FFQWEFSLSV LAGVLAVLGY SVNESVVIFD RIREAFRKFR KLSTTEVIDH AITSTMSRTI
ITHASTEAMV LSMFFFGGPS LHYFALALTI GILFGIYSSV FVAAAIAMWL GVKREDLIKA
PKASTDPNDP NAGATV
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