Gene Daci_0761 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0761 
Symbol 
ID5746315 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp846269 
End bp847744 
Gene Length1476 bp 
Protein Length491 aa 
Translation table11 
GC content76% 
IMG OID641295841 
ProductRND efflux system outer membrane lipoprotein 
Protein accessionYP_001561792 
Protein GI160896210 
COG category[M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1538] Outer membrane protein 
TIGRFAM ID[TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCTCC CATTCCCCCG AACCGCCGCC GCCGCGCTGG CAGCCGCACT GGCCACCGCC 
CTGGCGGGAT GTGCCTCCCT GGCGCCGCCG CACGAGCCGC CGCCCCTGCC CACGCCCGAG
GCCTGGCCTG CCCATCTGCA GGCGGGCGCC CAGGGTGTCG CCGCCGCCGG CCTGCCCTGG
CGCGAGTACT TCACCGACCC CGCGCTGCGC CAGCTCATCG CCACCGCGCT GGAGCACAAC
CGCGACCTGC GCGTGGCCGC GCTGCGCGCC GAAGAGGCGC GCGCGGCCTT CCAGATCCAG
CGCTCCGAGC TGTTCCCGGC CATTGGCGTG GGCGGCCAGG CCGCGCGGGC TCGCGTGCCT
GGCGACCTCA ACCTCTCGGG CCGCTCCGTG GTCAGCGGCG AGTACCGCGC CGAGGTCGGC
TTCAGCAGCT GGGAGCTGGA CCTGTGGGGC CGCGTGCGCA GCCTCAAGGA CGCGGCCCTG
CAGACCTGGC TGGCCAGCGA TGCGGGCCGC CACGCCGTGC AGACCGCGCT GATCGCCCAG
GTGGCCGACG GCTACCTGGG CCTGCGCGAG CTGGACGAGC GCGTGGCCAT TGCGCGCGAG
ACGCTGGCCA CGCGCCAGGA ATCCTTTCGC ATCTTCACGC GCCGCGAGGC CGTGGGCGCC
AGCTCGCGCC TGCAGCTGGC CCAGGTCCAG ACCCTGCTGA CCCAGGCCCA GGCCCTGCTG
GCCCAGCTGG AGCTGGCACG CGCGCAGCAG TTGCACGCCC TGGCCCAGCT GGTCGGCGCC
CACCCGGGCC CGCTGCCCGC CGCCGCACCC TTTGACGACG CCCTGGTGCT GGCCGAGCTG
CGGCCGGGCC TGCCCTCGGA ACTGCTCACG GCGCGGCCCG ACATTGCCGC CGCCGAGCAC
CAGCTGCGCG CGGCCCGGGC CCAGATCGGC GCGGCGCGCG CCGCCTTCTT CCCGCGCATT
GCGCTCACGG CCCGCTGGGG CACGGCCAGC GCCGAACTCG ACGGCCTGTT CGACGGCGGC
AGCCGCGCCT GGGCCTTCGT GCCCACGGTG TCCCTGCCCA TCTTCGACGG CGGCCGGCGC
CGCGCCAACC TGGAGCTGGG CGAGATCCGC AGCGACATGG CCGTGGCCCA GTACGAGAAA
GCCATCCAGA CCGCCTTCCG CGAGGTGGCC GACGGCCTGG CCGCGCGCCG CTGGCTGTCC
GAGCAGATCA CCGTGCAGCG CACCGCCGTG CAGGCCCAGG CCGAGCGTGC GCGGCTGGCG
CAGCTGCGCT ACGACAACGG CTCGGCCGCC TACCTGGAGG TGCTGGACGC CCAGCGCGAC
CTGCTGGCCG CACGCCAGCA ACTGGTGCAG GCGCGGCGCG CCCTGCTGTC CAGCCAGGTG
GGCCTGTATG CCGCCCTGGG CGGCGGCAGC GGCGCCGAAC CTGCCGCGCT GCCCGCCACC
CTGCCGGCCA CGCCTGCCGA TCCCCCGAAT TCCTGA
 
Protein sequence
MTLPFPRTAA AALAAALATA LAGCASLAPP HEPPPLPTPE AWPAHLQAGA QGVAAAGLPW 
REYFTDPALR QLIATALEHN RDLRVAALRA EEARAAFQIQ RSELFPAIGV GGQAARARVP
GDLNLSGRSV VSGEYRAEVG FSSWELDLWG RVRSLKDAAL QTWLASDAGR HAVQTALIAQ
VADGYLGLRE LDERVAIARE TLATRQESFR IFTRREAVGA SSRLQLAQVQ TLLTQAQALL
AQLELARAQQ LHALAQLVGA HPGPLPAAAP FDDALVLAEL RPGLPSELLT ARPDIAAAEH
QLRAARAQIG AARAAFFPRI ALTARWGTAS AELDGLFDGG SRAWAFVPTV SLPIFDGGRR
RANLELGEIR SDMAVAQYEK AIQTAFREVA DGLAARRWLS EQITVQRTAV QAQAERARLA
QLRYDNGSAA YLEVLDAQRD LLAARQQLVQ ARRALLSSQV GLYAALGGGS GAEPAALPAT
LPATPADPPN S