Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_0761 |
Symbol | |
ID | 5746315 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 846269 |
End bp | 847744 |
Gene Length | 1476 bp |
Protein Length | 491 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 641295841 |
Product | RND efflux system outer membrane lipoprotein |
Protein accession | YP_001561792 |
Protein GI | 160896210 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCTCC CATTCCCCCG AACCGCCGCC GCCGCGCTGG CAGCCGCACT GGCCACCGCC CTGGCGGGAT GTGCCTCCCT GGCGCCGCCG CACGAGCCGC CGCCCCTGCC CACGCCCGAG GCCTGGCCTG CCCATCTGCA GGCGGGCGCC CAGGGTGTCG CCGCCGCCGG CCTGCCCTGG CGCGAGTACT TCACCGACCC CGCGCTGCGC CAGCTCATCG CCACCGCGCT GGAGCACAAC CGCGACCTGC GCGTGGCCGC GCTGCGCGCC GAAGAGGCGC GCGCGGCCTT CCAGATCCAG CGCTCCGAGC TGTTCCCGGC CATTGGCGTG GGCGGCCAGG CCGCGCGGGC TCGCGTGCCT GGCGACCTCA ACCTCTCGGG CCGCTCCGTG GTCAGCGGCG AGTACCGCGC CGAGGTCGGC TTCAGCAGCT GGGAGCTGGA CCTGTGGGGC CGCGTGCGCA GCCTCAAGGA CGCGGCCCTG CAGACCTGGC TGGCCAGCGA TGCGGGCCGC CACGCCGTGC AGACCGCGCT GATCGCCCAG GTGGCCGACG GCTACCTGGG CCTGCGCGAG CTGGACGAGC GCGTGGCCAT TGCGCGCGAG ACGCTGGCCA CGCGCCAGGA ATCCTTTCGC ATCTTCACGC GCCGCGAGGC CGTGGGCGCC AGCTCGCGCC TGCAGCTGGC CCAGGTCCAG ACCCTGCTGA CCCAGGCCCA GGCCCTGCTG GCCCAGCTGG AGCTGGCACG CGCGCAGCAG TTGCACGCCC TGGCCCAGCT GGTCGGCGCC CACCCGGGCC CGCTGCCCGC CGCCGCACCC TTTGACGACG CCCTGGTGCT GGCCGAGCTG CGGCCGGGCC TGCCCTCGGA ACTGCTCACG GCGCGGCCCG ACATTGCCGC CGCCGAGCAC CAGCTGCGCG CGGCCCGGGC CCAGATCGGC GCGGCGCGCG CCGCCTTCTT CCCGCGCATT GCGCTCACGG CCCGCTGGGG CACGGCCAGC GCCGAACTCG ACGGCCTGTT CGACGGCGGC AGCCGCGCCT GGGCCTTCGT GCCCACGGTG TCCCTGCCCA TCTTCGACGG CGGCCGGCGC CGCGCCAACC TGGAGCTGGG CGAGATCCGC AGCGACATGG CCGTGGCCCA GTACGAGAAA GCCATCCAGA CCGCCTTCCG CGAGGTGGCC GACGGCCTGG CCGCGCGCCG CTGGCTGTCC GAGCAGATCA CCGTGCAGCG CACCGCCGTG CAGGCCCAGG CCGAGCGTGC GCGGCTGGCG CAGCTGCGCT ACGACAACGG CTCGGCCGCC TACCTGGAGG TGCTGGACGC CCAGCGCGAC CTGCTGGCCG CACGCCAGCA ACTGGTGCAG GCGCGGCGCG CCCTGCTGTC CAGCCAGGTG GGCCTGTATG CCGCCCTGGG CGGCGGCAGC GGCGCCGAAC CTGCCGCGCT GCCCGCCACC CTGCCGGCCA CGCCTGCCGA TCCCCCGAAT TCCTGA
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Protein sequence | MTLPFPRTAA AALAAALATA LAGCASLAPP HEPPPLPTPE AWPAHLQAGA QGVAAAGLPW REYFTDPALR QLIATALEHN RDLRVAALRA EEARAAFQIQ RSELFPAIGV GGQAARARVP GDLNLSGRSV VSGEYRAEVG FSSWELDLWG RVRSLKDAAL QTWLASDAGR HAVQTALIAQ VADGYLGLRE LDERVAIARE TLATRQESFR IFTRREAVGA SSRLQLAQVQ TLLTQAQALL AQLELARAQQ LHALAQLVGA HPGPLPAAAP FDDALVLAEL RPGLPSELLT ARPDIAAAEH QLRAARAQIG AARAAFFPRI ALTARWGTAS AELDGLFDGG SRAWAFVPTV SLPIFDGGRR RANLELGEIR SDMAVAQYEK AIQTAFREVA DGLAARRWLS EQITVQRTAV QAQAERARLA QLRYDNGSAA YLEVLDAQRD LLAARQQLVQ ARRALLSSQV GLYAALGGGS GAEPAALPAT LPATPADPPN S
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