| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_0658 |
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| Symbol | |
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| ID | 5746201 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 719386 |
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| End bp | 720123 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641295727 |
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| Product | chemoreceptor glutamine deamidase CheD |
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| Protein accession | YP_001561689 |
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| Protein GI | 160896107 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG1871] Chemotaxis protein; stimulates methylation of MCP proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.0343248 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATCGGAG ACCGCCCTGC CTTCGCACCG CCACCGGCGC CCTCGGAGCG TCGCCGGATG
CCGCGCATCA ACAGCTATAC CGCTGCAGAC TATCCGGCGC CGGGCGATCC GGTGCCGCGT
TCCTCGCTGG AGCAGCTCAA GCGCCAGCAG CGCTACCCTG GCGAGGCTTC GTTCTTCTAT
TACGACCCGC ATTTCCAGCA CAACGCCGTC AAGGTGCTGC CCGGCGAATA CTTTGTCTCC
AACGAGGACG TGATCCTGGT CACCGTGCTG GGCTCTTGCA TCTCGGCCTG CATCTGGGAC
CGCACCATGC GCGTGGGCGG CATGAACCAT TTCATGCTGC CCGACGGCGA CTCTGCCGAT
GCATCGGGCC GCTACGGCTC GTACGCCATG GAGTTGCTGA TCAACGAAAT GCTCAAGCTC
GGTGCCCGGC GCGAGTCGCT GCAGGCCAAG ATCTTCGGCG GCGGGCAGGT GATGCACAAC
TTCACCACCA TGAACGTGGG CGAACGCAAT ACCGCCTTCG TCACGCAGTA CCTGCAGACC
GAACGCATCC CCATCGTCTC GGAGGATGTG CTGGATATCT ACCCTCGCAA GGTGGTGTTC
TTCCCCGCCA GCGGCAAGGC CATGGTCAAG CGCCTGGCAC ATGCCCATCC GGAGGAGCTG
GTACAGCAGG AATTCACGCG CGGCAATGCA GCCGTCGTGG CACGCAATAC GGCAGGCGGC
TCGGTCGACC TGTTTTGA
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| Protein sequence | MIGDRPAFAP PPAPSERRRM PRINSYTAAD YPAPGDPVPR SSLEQLKRQQ RYPGEASFFY
YDPHFQHNAV KVLPGEYFVS NEDVILVTVL GSCISACIWD RTMRVGGMNH FMLPDGDSAD
ASGRYGSYAM ELLINEMLKL GARRESLQAK IFGGGQVMHN FTTMNVGERN TAFVTQYLQT
ERIPIVSEDV LDIYPRKVVF FPASGKAMVK RLAHAHPEEL VQQEFTRGNA AVVARNTAGG
SVDLF
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