| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_0651 |
|---|
| Symbol | |
|---|
| ID | 5746194 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | - |
|---|
| Start bp | 712795 |
|---|
| End bp | 713424 |
|---|
| Gene Length | 630 bp |
|---|
| Protein Length | 209 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641295720 |
|---|
| Product | two component LuxR family transcriptional regulator |
|---|
| Protein accession | YP_001561682 |
|---|
| Protein GI | 160896100 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 0.713834 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGATCCACG TGGTGCTGTG CGACGACCAT GCGGTGCTGC GCCGGGGCAT CCGTGACACC
CTGGCCGAGG CAGTGGACAT CAGCGTCACC GCCGAAGCAG GCAGCTATGC CGAGCTGCGC
GAACAGCTGC GCACCGCCAC CTGCGACGTG CTGCTGCTGG ACATCAACAT GCCCGGCCGC
AGTGGCCTGG AAGCCCTGGC CAGCGTGCGC GAAACCCATC CGCTGATCAA GGTGCTCATG
GTCTCCATGT ACCCCGAGGA TCAGTACGCG CTGCGCTGCC TGAAGGCGGG CGCGCAGGGC
TACGCCAACA AGGCAGGCGA CCCGGTGCTG CTGATCGAGG CGGTGCGCAC CGTGGCCACG
GGGCGCAAGT ACCTGACGTC CGAAGTGGCC CAGATGCTGG CCGACAGCCT GGCCCAGCCC
GCACCCCAGG TGCCGCATGA AAGCCTGTCC GAGCGCGAGC TGCAGACGCT GATCAAGATC
GCGGCCGGCC AGCGGCTGAC CGACATCGCC ACCGAGCTGA TGCTCAGCCC CAAGACCGTC
AGCGTCTACC GGGCGCGCGT GCTGGAAAAA CTGCAGATGA GCAGCAATGC CGAACTCACG
GCCTACGCCA TCCACAACCA GCTGATCTGA
|
|---|
| Protein sequence | MIHVVLCDDH AVLRRGIRDT LAEAVDISVT AEAGSYAELR EQLRTATCDV LLLDINMPGR
SGLEALASVR ETHPLIKVLM VSMYPEDQYA LRCLKAGAQG YANKAGDPVL LIEAVRTVAT
GRKYLTSEVA QMLADSLAQP APQVPHESLS ERELQTLIKI AAGQRLTDIA TELMLSPKTV
SVYRARVLEK LQMSSNAELT AYAIHNQLI
|
|---|
| |