Gene Daci_0650 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0650 
Symbol 
ID5746193 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp711976 
End bp712746 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content64% 
IMG OID641295719 
Productflagellar biosynthetic protein FliR 
Protein accessionYP_001561681 
Protein GI160896099 
COG category[U] Intracellular trafficking, secretion, and vesicular transport
[N] Cell motility 
COG ID[COG1684] Flagellar biosynthesis pathway, component FliR 
TIGRFAM ID[TIGR01400] flagellar biosynthetic protein FliR 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCACCT TCAGCGAAGC CCAACTGGTG GCGTGGCTGT CGCCCGTTCT CTGGCCGTTT 
CTGCGCGTGC TGGCCATGTT CTCCGTGGCC CCCGTGTTCT CGCAGCGCGT CATTCCCATG
CGGCTGAAGA TCGGCCTGGC CTTCCTGGTC GCGGTGTGCG CGCAGCCCGT GCTGGGCGAC
CAGCCCGTGA TCGGCATCAA CTCGCCGCAG GCGCTGGGCA CGCTGATACA GCAGGTCGGC
GTGGGGCTGG CCGTGGGCTT TGCCGTGCGC CTGGTGTTTG CCGCCGTGGA GGTTGCGGGC
GAGGTGGTCG GCCTGCAGAT GGGCCTGAAC TTCGCCAGCT TCTTCGATCC GACCACGAAT
GCCCAGCTCA GCGCAGTGGC GCGCTTCATG GTCCAGATTT CCACGCTGCT GTTCATCGTC
ATCAACGGGC ACCTGCTGGT GCTGATGGCC GTGCTCAAGA GTTACGAGGC GTTTCCTGTG
GACGGCAGCT TCCTGCAGGC CATCAACCAG ATGCGGCTGC ACGAGATGGG TGCGGCGGTC
TTCGCCAGTG CCTTCTGGAT CGCCCTGCCC ATGGTCGCCA TGCTGCTGTT CGTGAACCTG
GTGCTGGGCA TCATTTCGCG CGTGGCACCG CAGATGAACA TCTATGCCGT GGGTTTTCCG
GTCACGCTCA CCGTGGGCCT GACGGGATTG ATGGCCACGC TGCCGCTGCT CGAGCAGCCC
CTGGTCGCCT TGCTGCAGCG CGGCATTGCG GTATTTGGCA CTTCAATGTA A
 
Protein sequence
MITFSEAQLV AWLSPVLWPF LRVLAMFSVA PVFSQRVIPM RLKIGLAFLV AVCAQPVLGD 
QPVIGINSPQ ALGTLIQQVG VGLAVGFAVR LVFAAVEVAG EVVGLQMGLN FASFFDPTTN
AQLSAVARFM VQISTLLFIV INGHLLVLMA VLKSYEAFPV DGSFLQAINQ MRLHEMGAAV
FASAFWIALP MVAMLLFVNL VLGIISRVAP QMNIYAVGFP VTLTVGLTGL MATLPLLEQP
LVALLQRGIA VFGTSM