Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_0646 |
Symbol | |
ID | 5746189 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | + |
Start bp | 710094 |
End bp | 710525 |
Gene Length | 432 bp |
Protein Length | 143 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641295715 |
Product | flagellar motor switch protein FliN |
Protein accession | YP_001561677 |
Protein GI | 160896095 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1886] Flagellar motor switch/type III secretory pathway protein |
TIGRFAM ID | [TIGR02480] flagellar motor switch protein FliN |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAACTG AAGATACGCA AAAGCCCGCT GGCGATGATC CGTTCTCGGG CTGGGCAGAG GCATTGGACG AGCAGCGCGA GCGCGACGCC AAGCTGGAAG AGGAGCAGGG CGGCCCGCTG ACGGGCGAGC CCGTGCGTCC CTACGCCGGT GGCGCCGATG TGCCGGTCAA CGACATCAAC ATGGTGCTGG ACATTCCGGT GCAGCTGTCG GTGGAGCTGG GCCGCACCAA GGTGCCGATC AAGTACATCC TGCAACTGGC CCAGGGCTCG GTGGTCGAGC TCGACGCACT GGCCGGCGAG CCCATGGACG TGCTGGTCAA CGGCTACCTG ATCGCCCAGG GCGAGGTGGT GGTGGTCAAC GACAAGTTCG GTATCCGCCT GACCGACGTG GTCACGCCGT CCGAGCGCCT GCGCCGGGTC AGCCGTGGCT GA
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Protein sequence | MATEDTQKPA GDDPFSGWAE ALDEQRERDA KLEEEQGGPL TGEPVRPYAG GADVPVNDIN MVLDIPVQLS VELGRTKVPI KYILQLAQGS VVELDALAGE PMDVLVNGYL IAQGEVVVVN DKFGIRLTDV VTPSERLRRV SRG
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