Gene Daci_0646 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0646 
Symbol 
ID5746189 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp710094 
End bp710525 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content67% 
IMG OID641295715 
Productflagellar motor switch protein FliN 
Protein accessionYP_001561677 
Protein GI160896095 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1886] Flagellar motor switch/type III secretory pathway protein 
TIGRFAM ID[TIGR02480] flagellar motor switch protein FliN 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAACTG AAGATACGCA AAAGCCCGCT GGCGATGATC CGTTCTCGGG CTGGGCAGAG 
GCATTGGACG AGCAGCGCGA GCGCGACGCC AAGCTGGAAG AGGAGCAGGG CGGCCCGCTG
ACGGGCGAGC CCGTGCGTCC CTACGCCGGT GGCGCCGATG TGCCGGTCAA CGACATCAAC
ATGGTGCTGG ACATTCCGGT GCAGCTGTCG GTGGAGCTGG GCCGCACCAA GGTGCCGATC
AAGTACATCC TGCAACTGGC CCAGGGCTCG GTGGTCGAGC TCGACGCACT GGCCGGCGAG
CCCATGGACG TGCTGGTCAA CGGCTACCTG ATCGCCCAGG GCGAGGTGGT GGTGGTCAAC
GACAAGTTCG GTATCCGCCT GACCGACGTG GTCACGCCGT CCGAGCGCCT GCGCCGGGTC
AGCCGTGGCT GA
 
Protein sequence
MATEDTQKPA GDDPFSGWAE ALDEQRERDA KLEEEQGGPL TGEPVRPYAG GADVPVNDIN 
MVLDIPVQLS VELGRTKVPI KYILQLAQGS VVELDALAGE PMDVLVNGYL IAQGEVVVVN
DKFGIRLTDV VTPSERLRRV SRG