Gene Daci_0645 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0645 
Symbol 
ID5746188 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp709100 
End bp710104 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content63% 
IMG OID641295714 
Productflagellar motor switch protein FliM 
Protein accessionYP_001561676 
Protein GI160896094 
COG category[N] Cell motility 
COG ID[COG1868] Flagellar motor switch protein 
TIGRFAM ID[TIGR01397] flagellar motor switch protein FliM 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGATT CGTTTCTCTC CCAGGAAGAA GTCGATGCCC TTTTGGAGGG GGTGACCGGC 
GAGAGCCAGA AATCCACGAC CGAGGAGGTC GAGGCGGGCA TCATCCGCCA GTACGACATC
TCCAGCCAGG AGCGCATCGT GCGCGGGCGC ATGCCGACGA TGGAAATCGT CAACGAGCGC
TTTGCCCGCA ACTTCCGCAT CGGCCTGTTC AACTTCATCC GCCGCAGCCC CGAAGTGTCC
GTGGGCACGG TGTCGGTGCA GCGCTACAGC GCCTTCCTGC GCGAGCTGGT GGTGCCCACC
AACTTCAACA TCGTCGCCAT CCGTCCGCTG CGCGGCAGCG GCCTGGTGGT CTGCGACCCC
TCGCTGGTGT TCGGTGTCAT CGATACGCTG TACGGCGGCA CGGGCCGGCT GCAGACGCGT
ATCGAAGGAC GTGACTTCTC GCACACCGAG CAGCGCGTGA TCAACCGCCT GGTCAACGTG
ATCTGCGAGG AATACAAGAA GGCCTGGCAC GGCATCTATC CGCTGGAGCT GGGCTACCAG
CGTTCGGAGA TGCAGCCGCA GTTCGCCAAC ATCGCCACGC CCAGCGAAAT CGTCGTGTCC
ACGGCCTTTC AGCTGGAGAT CGGCGACATC TCGGGCTCCA TCCACATCTG CATGCCCTAT
GCAACGCTGG AGCCCATCCG TGATGTGCTG TATTCCTCGA CACAGGGCGA CTCCATCGAA
GTGGACCGCC GCTGGGTCAA GGTGCTCAAG CGCGAGATCC AGGCCGCCGA GGTGACCCTG
GTGGCCGAGC TGGCACGTGC CGACGCCACG GTGGAGCAGC TGCTGGCCAT GCGCCCCGGC
GATTTCATCG AACTCGACCG CGAGCCGCTG ATCCGCGCCT CCATTGGCGG CGTTCCGATT
TTCGAGTGCC AGTACGGCAC TCACAACGAC AAGTACGCAA TCCGCGTCGA GAACTGCCTG
CGTGGCGCCG ACGCTGGCTG GATGGGAGAA AACAATGGCA ACTGA
 
Protein sequence
MSDSFLSQEE VDALLEGVTG ESQKSTTEEV EAGIIRQYDI SSQERIVRGR MPTMEIVNER 
FARNFRIGLF NFIRRSPEVS VGTVSVQRYS AFLRELVVPT NFNIVAIRPL RGSGLVVCDP
SLVFGVIDTL YGGTGRLQTR IEGRDFSHTE QRVINRLVNV ICEEYKKAWH GIYPLELGYQ
RSEMQPQFAN IATPSEIVVS TAFQLEIGDI SGSIHICMPY ATLEPIRDVL YSSTQGDSIE
VDRRWVKVLK REIQAAEVTL VAELARADAT VEQLLAMRPG DFIELDREPL IRASIGGVPI
FECQYGTHND KYAIRVENCL RGADAGWMGE NNGN