Gene Daci_0620 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0620 
Symbol 
ID5746163 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp685521 
End bp685934 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content64% 
IMG OID641295689 
Productflagellar protein FliS 
Protein accessionYP_001561651 
Protein GI160896069 
COG category[N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1516] Flagellin-specific chaperone FliS 
TIGRFAM ID[TIGR00208] flagellar biosynthetic protein FliS 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACACAT CGCTCAACCG CCGTGCTGCA AGTGCCTACG CCCAGGTCGG CGTCCAGTCC 
TCCGTGGACG GCGCATCGCC CCACCAGCTG ATCCAGCTGC TGTTCGACGC GCTCGAAAAA
GCGCTGAACG CGGCCAAGGG AGCCATGCAG CGTGGCGACA TCGGTGAGAA GGGTGTGCAG
ATCGGCAAGG CCGTGCGCAT TCTGGAAGAA GGCCTGAAGG CCTCCGTCAA TCCCGATGAA
GGTGGCGAGC TGGCCCAGAA CCTGATTTCC GTCTACGACT ACAGCATCAC CCAGCTGACG
CTGGCCAATC TGCGCAACGA CACGGCGCTG CTGCAAAGCG CGCAGGATGT GCTGGCTCCG
ATTGCCCATG GTTGGCGCGA CATCGCCAAC GCGCCAGCCG TTGCCGGGAC CTAG
 
Protein sequence
MYTSLNRRAA SAYAQVGVQS SVDGASPHQL IQLLFDALEK ALNAAKGAMQ RGDIGEKGVQ 
IGKAVRILEE GLKASVNPDE GGELAQNLIS VYDYSITQLT LANLRNDTAL LQSAQDVLAP
IAHGWRDIAN APAVAGT