| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_0593 |
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| Symbol | |
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| ID | 5746136 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 654562 |
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| End bp | 655914 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641295662 |
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| Product | GntR family transcriptional regulator |
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| Protein accession | YP_001561624 |
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| Protein GI | 160896042 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCAGAC CCTTCACGCC CGCGACAAAA TACCCTCATT GCCGGCGCAA GAGCGAGCGC
ACTATCCGCA CTCCGCTCTT CACATGCGGC CGGCCCGTGC CCCACGACGG CATGGCAATC
CATACCAGCC CGCCCGCATG GCGGGCACCG CAAAGACCTG GAACTGCTTT TTTTATGACG
ACCTGGACGC TGGCAGACCG TGCTGCCAAG ATGAACCCCT CCGCCATCCG CGAAATCCTC
AAGCTCACCG ACCGTCCCGG CATCATCAGC ATGGCGGGCG GCCTGCCCTC GCCGCTGGCC
TTCCCGCTGG ACGAGTTCAC CCAGGCCTGC CAGTCCGTGA TGCAGCGCGA TGGCGCCTCG
GCCCTGCAAT ACGCCACCAG CGAGGGCTTC GCGCCCCTGC GCCAGGCCGT GGCCGACTTC
CTGCCCTGGG AAGTGGACCC CGACCAGGTG CTGATCACCA CGGGCTCGCA GCAGGCGCTG
GACCTGATCG GCAAGGTCTT CCTGGACCGT GGCAGCCGCA TGCTGGTCGA AAAGCCCACC
TACCTGGGCG CGCTGCAGGC CTTTGCACCG CAGGAACCGA TTCCCGTGGG CGTGGACAGC
GATGACGACG GCATCCTCGT CGAGGACTTC GCCGCCAAGG CCGGCACCGG CGCCGACAAG
GCCCGCCTGG CCTACGTGCT GCCCAACTTC CAGAACCCCA CCGGCCGCAC CATGGCCGAG
GCACGCCGCC AGGCCCTGGT GGACAAGGCG CGCGAACTCA ACATCCCGCT GATCGAGGAC
AACCCCTACG GCGACCTGTG GTTCGAGCAG GCCCCTGCCC TGCCGCTGGC CGCGCGCAAC
CCCGAAGGCG TGATCTACCT GGGCTCGTTT TCCAAGGTGC TGGCCCCGGG CCTGCGCATC
GGCTTCCTGG TGGCGCCCAA GTCCGTCTAC AACAAGCTGC TGCAGGCCAA GCAGGCGGCC
GACCTGCACA CCCCGGGCTT CAACCAGCGC GTGGTCTCCG AGGTCATCAA GGACGGCTTC
CTGGACCGCC ATGTGCCCAC CATCCGCGCC ATGTACAAGC GCCAGCGCGA CGCCATGCTG
GCCGCGCTGG AACGCGAAAT GGCCGGCCTG GACGTGCAGT GGACCCGTCC CGTGGGCGGC
ATGTTCCTGT GGGTTCGCCT GCCCAAGGGC ATGGATGCGC AAAAGCTGCT GCCCGCCGCC
GTGGAACGCG GCACGGCCTT CGTGCCCGGC GCGCCGTTCT ACGCGGACGA GCCCCAGGCC
AACACGCTGC GCCTGTCCTA CGTGACGGTG TCGGCCGAGC AGATCGACAA GGGCATCGCC
GCCCTGGCCG ACGCCATCCG CTCCACGATG TAA
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| Protein sequence | MRRPFTPATK YPHCRRKSER TIRTPLFTCG RPVPHDGMAI HTSPPAWRAP QRPGTAFFMT
TWTLADRAAK MNPSAIREIL KLTDRPGIIS MAGGLPSPLA FPLDEFTQAC QSVMQRDGAS
ALQYATSEGF APLRQAVADF LPWEVDPDQV LITTGSQQAL DLIGKVFLDR GSRMLVEKPT
YLGALQAFAP QEPIPVGVDS DDDGILVEDF AAKAGTGADK ARLAYVLPNF QNPTGRTMAE
ARRQALVDKA RELNIPLIED NPYGDLWFEQ APALPLAARN PEGVIYLGSF SKVLAPGLRI
GFLVAPKSVY NKLLQAKQAA DLHTPGFNQR VVSEVIKDGF LDRHVPTIRA MYKRQRDAML
AALEREMAGL DVQWTRPVGG MFLWVRLPKG MDAQKLLPAA VERGTAFVPG APFYADEPQA
NTLRLSYVTV SAEQIDKGIA ALADAIRSTM
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