Gene Daci_0583 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0583 
Symbol 
ID5746126 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp642838 
End bp643800 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content69% 
IMG OID641295652 
Productputative hemolysin-like protein 
Protein accessionYP_001561614 
Protein GI160896032 
COG category[R] General function prediction only 
COG ID[COG3176] Putative hemolysin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACATGTT GCTGTAACGC AACCGTCGCG GGACTTTCAT GGCCGCTTTC CACAATGGCG 
GCACGCAGGC AAACCGAGTG GCACAGGCAG GTCACCGACT GCGTCCAACA TGACGAGGAA
GGCGGGCATA TGGACGTTCT GGACACCCTT CGCAACGCGG CGATCGACGT CGCCAAGCCC
CCGCTTTCCG CGCTTCTCCA GCCACCCCAG GCCGCAGACA AACCGCTGCG GCTGGACGTG
CGCTGGGCTC GGCACCTTGA CGAAGTGCGA CAGGTGCAGC GCCTGCGCCA CGCGGTGTTC
GCCGCCGAGA TGGGCGCCGT GCTGCAGACG CCGCTGGCCG GACACGACAT CGACGCCTTC
GACGATTTCT GCGAGCACCT GATGGTCTGC GATGCCGACA AGGGCGTGGT CATCGGCACC
TACCGCCTGC TCACCCCCAC CCAGGCGCTG CGCGCGGGCG GCCTGTACTC CGACCAGGAA
TTCGACCTCG CCCCGCTGCA CGCCTGGCGC CCGCGCATGG TGGAGCTGGG CCGCAGCTGC
GTGCATGCGT CGCACCGCCA GGGCGGCGTG ATCCTGGCGC TGTGGGGCGC CCTGGCCGAA
TTCATGCAGC GCAACCAGCT GGACGCCATG GTCGGCTGCG CCAGCATTCC CATGCAGTAC
CCGGGCCTGG CCCACGGCGA GGGCCCGGCG CGCGTCTGGC AGCAACTGCG CCAGACCCAT
CTGGCCGAGC CCGAGCTGCA GGTGCGTCCC CGCGTGGCCC TGCCCGAGGA GTTGGCCTCG
GTCAGCACCA GCGGCATGAG CGTGGAGCCG CCCGCGCTGA TCCAGGGCTA TCTGCGCACG
GGCGCCAAGG TGCTGGGCGC ACCGGCCTGG GACAGCGACT TCAACACGGC AGACCTGCCC
ATCATGATGC GCATGCAGGA CCTGCCTTCG CGCTACATGC GCCTGTTCAC GCGGCGCGGC
TGA
 
Protein sequence
MTCCCNATVA GLSWPLSTMA ARRQTEWHRQ VTDCVQHDEE GGHMDVLDTL RNAAIDVAKP 
PLSALLQPPQ AADKPLRLDV RWARHLDEVR QVQRLRHAVF AAEMGAVLQT PLAGHDIDAF
DDFCEHLMVC DADKGVVIGT YRLLTPTQAL RAGGLYSDQE FDLAPLHAWR PRMVELGRSC
VHASHRQGGV ILALWGALAE FMQRNQLDAM VGCASIPMQY PGLAHGEGPA RVWQQLRQTH
LAEPELQVRP RVALPEELAS VSTSGMSVEP PALIQGYLRT GAKVLGAPAW DSDFNTADLP
IMMRMQDLPS RYMRLFTRRG