| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_0549 |
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| Symbol | tgt |
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| ID | 5746092 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 603619 |
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| End bp | 604791 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641295618 |
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| Product | queuine tRNA-ribosyltransferase |
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| Protein accession | YP_001561580 |
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| Protein GI | 160895998 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0343] Queuine/archaeosine tRNA-ribosyltransferase |
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| TIGRFAM ID | [TIGR00430] tRNA-guanine transglycosylase, queuosine-34-forming
[TIGR00449] tRNA-guanine transglycosylases, various specificities |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCAAT TCGACCTGCT CAAGACCGAT CCCTCCAGCC ACGCGCGCCG CGGCCAGCTC
ACGCTCAACC ACGGCGTGGT GCAGACACCC ATCTTCATGC CCGTGGGCAC CTATGGCACC
GTCAAGGGCG TGATGCCGCG CAGCCTGCAG GAGATGGGCG CGCAGATCAT CCTGGGCAAC
ACCTTCCACC TGTGGATGCG CCCGGGGCTG GACATCATGC AGAGCTTCGG CGGCCTGCAC
GGCTTCGAGA AGTGGGACAA GCCCATCCTC ACCGACTCGG GCGGATTCCA GGTCTGGAGC
CTGGGCGCCA TGCGCAAGAT CACCGAGGAA GGCGTGCACT TCGCCAGCCC GGTCAACGGC
GACAAGCTGT TCATGTCGCC CGAAGTCAGC ATGCAGATCC AGACCGTGCT GAACTCGGAC
ATCGTCATGC AGCTGGACGA ATGCACGCCC TACGAGACCA ACGGCCACAA GACCACCGAG
GCCGAGGCGC GCAAGAGCAT GGAGATGAGC CGCCGCTGGG CCAAGCGCTC CAGCGACGAG
TTCCAGCGCC TGGGCAACCC CAATGCGCTG TTCGGCATCG TGCAGGGCGG CATGTACGAG
AACCTGCGCG AGGAATCGCT GCAGGCCCTG GTCGAGATGG ACTTCCCCGG CTACGCCGTG
GGCGGCGTCT CGGTGGGCGA ACCCAAGGAC GAGATGCTGG CGATCATGGC CCACACGCCC
CACCGCCTGC CGGCCCACAA GCCACGCTAC CTGATGGGCG TGGGCACGCC CGAGGACCTG
GTGCAGGGCG TGGCCGACGG CGTGGACATG TTCGACTGCG TCATGCCCAC GCGCAATGCG
CGCAACGGCA CCATCTTCAC GCGCTATGGC GACCTGAAGA TCCGCAACGC ACGCCACAAG
ACCGACCACC AGCCGCTGGA CCCCAGCTGC ACCTGCCATG CCTGCGCAGG CACCAGCGGC
GTGAGCTGGG AGCAAGGCGG ACGCGACGGC TTCTCGCGCG CCTACCTGCA CCACCTGGAC
CGCTGCGGCG AGATGCTGGG CCCCATGCTC ACCACCATCC ACAACCTGCA CTACTACCTG
AACCTGATGC AGGAAGTGCG CAATGCGCTG GAGGCGGGCA ACTTCACTGA AATGCGCGCA
CGCTTCAAGG CCGAGCGCGC CCGGGGCGTC TGA
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| Protein sequence | MLQFDLLKTD PSSHARRGQL TLNHGVVQTP IFMPVGTYGT VKGVMPRSLQ EMGAQIILGN
TFHLWMRPGL DIMQSFGGLH GFEKWDKPIL TDSGGFQVWS LGAMRKITEE GVHFASPVNG
DKLFMSPEVS MQIQTVLNSD IVMQLDECTP YETNGHKTTE AEARKSMEMS RRWAKRSSDE
FQRLGNPNAL FGIVQGGMYE NLREESLQAL VEMDFPGYAV GGVSVGEPKD EMLAIMAHTP
HRLPAHKPRY LMGVGTPEDL VQGVADGVDM FDCVMPTRNA RNGTIFTRYG DLKIRNARHK
TDHQPLDPSC TCHACAGTSG VSWEQGGRDG FSRAYLHHLD RCGEMLGPML TTIHNLHYYL
NLMQEVRNAL EAGNFTEMRA RFKAERARGV
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