Gene Daci_0505 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0505 
Symbol 
ID5746047 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp536220 
End bp536804 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content58% 
IMG OID641295573 
ProductNusG antitermination factor 
Protein accessionYP_001561536 
Protein GI160895954 
COG category[K] Transcription 
COG ID[COG0250] Transcription antiterminator 
TIGRFAM ID[TIGR00922] transcription termination/antitermination factor NusG 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGCTG TCGAAACGGG TGTGAACGAC GGAGGGGCAG CGCCTGCCAA TCCGGATCTG 
CGCTGGTACA TCGTCCATGC CTATTCCGGC ATGGAAAAGG CGGTTGAGCG CAACATCATC
GAGCGCATCG CGCGCTCTGA CATGCAGTCC AAGTTCGGTC GCATTCTTGT CCCCACTGAA
GAAGTGGTGG AAATGAAGAA TGGCCAGCGC CGTACTACCG AGCGCCGTCT GTTCCCTGGC
TACGTGTTCG TCGAGATGGT CATGGACGAC GACACCTGGC ACTTGGTCAA GCACACCAGC
AAGGTGACGG GTTTCGTGGG CGGTGCCAAG AACCGTCCTG CGCCGATTTC CGAAGAGGAA
GTGCGCAAGA TCGTCAGCCA GATGCAGGAA GGCACGGAAA AGCCGCGTCA CAAGGTCGAG
TTCATGCCCG GCGAGCTGGT GCGTGTCAAG GAAGGTCCGT TCACGGACTT CAACGGCTCT
GTCGAAGAAG TCAACTACGA GAAGAGCCGT CTGCGCGTCT CCGTGATGAT CTTCGGTCGC
TCCACGCCGG TCGAGCTTGA ATTTGCCCAG GTTGAAAAAA CCTGA
 
Protein sequence
MDAVETGVND GGAAPANPDL RWYIVHAYSG MEKAVERNII ERIARSDMQS KFGRILVPTE 
EVVEMKNGQR RTTERRLFPG YVFVEMVMDD DTWHLVKHTS KVTGFVGGAK NRPAPISEEE
VRKIVSQMQE GTEKPRHKVE FMPGELVRVK EGPFTDFNGS VEEVNYEKSR LRVSVMIFGR
STPVELEFAQ VEKT