| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_0500 |
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| Symbol | |
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| ID | 5746037 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 528529 |
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| End bp | 531684 |
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| Gene Length | 3156 bp |
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| Protein Length | 1051 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641295563 |
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| Product | hydrophobe/amphiphile efflux-1 (HAE1) family protein |
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| Protein accession | YP_001561531 |
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| Protein GI | 160895949 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAAGT TCTTTATCGA CAGACCGATC TTTGCATGGG TCGTCGCGCT ATTCATCATC
GTCCTCGGTG GTATCGCGCT GACCAAGCTT CCGATCGCTC AATACCCTAA GGTGGCTCCT
CCGGCCATCG TCATCAACAC CGCCTACCCA GGCGCGTCCG CCAAGGTGCT CGAAGACAGC
GTGCTGTCCG TGATCGAGCG CGAGATGAAC GGCTCGCCCG GTCTGGTCTA CATGGAGTCG
GTGGCCCAGG CCGATGGCAC GGGCAGCATC ACCATCAGCT TCGAGGCTGG CACCAACGTG
GACCTGGCGC AGGTGGACGT GCAAAACCGC CTGTCGCGCG CCACGCCGCG CCTGCCTGCG
TCCGTGACGC AGCAGGGCGT GCGCGTGGAC AAGGCGTCGT CCAACTTCCT GCTGTTCATC
ATGCTGTCGT CCGAGGACGC CAAGGCCTAT GACACGGTGG CCTTGGGCGA CTATGCCTCG
CGCAACATCG TGCCCGAAAT CCAGCGTGTG GCCGGCGTGG GCCAGGCACA GCTGTTCGGT
ACCGAAAAGG CGATGCGCAT CTGGTTCGAT CCCGCCAAGC TGCAGGGCTA CAAGCTCTCG
GCCGAGGACG TGACGGCCGC CATCCGCAGC CAGAACGCCC AGGTGGCCAG CGGCGCCATC
GGCGACCTGC CCAACATCAC GGGCCAGAAG ATCGCCGCCA CGGTGACGGT GATGGGCCAG
CTGTCTTCGA TCGGCCAGTT CGAGAACATC GTGCTGCGCG CCAATCCCGA TGGCTCCACC
GTGCGCCTCA AGGACGTGGC GACCGTCGAG ATCGGCGGCC AGGCCTACGC GACCTCCGCC
CGCCTGAACG GCAAGGATGC CGTGGGTATC GGCGTCCAGC TGACGCCCAG CGGCAATGCG
CTGGCGACCG CCAAGGCCGT GCATGCGCGC ATGGAAGAGC TGCAGAAGTT CTTCCCCAAG
GGCGTGAAGT ACTCCATTCC CTACGACAGC TCCAAGTTCG TGAGCATCTC CATCGAGAAG
GTCGCCCACA CGCTGCTGGA AGCCATCGTG CTGGTGTTCC TGGTGATGTT CCTGTTCCTG
CAGAACTGGC GCTACACGCT GATCCCGACC ATCGTGGTGC CCATTGCACT GCTGGGCACC
TTCGCGGTCA TGCAGGCCGT GGGCTTCTCG ATCAACGTGC TGGCCATGTT CGGCATGGTG
CTGGTCATCG GCATCGTGGT GGATGACGCC ATCGTGGTGG TGGAGAACGT CGAGCGCATC
ATGAGCGAGG AAGGCCTGCA GCCGCGCGAG GCCGCGATCA AGGCCATGGG CCAGATCTCG
GGCGCCATCG TGGGCATTAC GCTGGTGCTG ATCGCGGTGT TCATACCGCT GGCCTTCTTC
GCGGGGTCCA CCGGCAATAT CTACCGGCAG TTCTCCATCG TGATGGTGGC CTCCATCAGC
TTCTCGGCCT TCATGGCGCT GACGCTGACA CCGGCCCTGT GCGCAACGCT GCTCAAGCCC
GTGGAAGCCG GTCACCACCA CGAGAAGAAG GGCTTCTTCG GCTGGTTCAA CCGCACGTTC
GCACGCTCGG CCAAGTCCTA CGAGGGCTGG GTGGCCCGAC TGCTCAAGCG TTCGGTGCTG
ATGATCGGCG TGTACCTGGC CGTGATCGCG GGCGCCGTGG TGGTGTTCCG TGGCCTGCCG
ACCTCGTTCC TGCCGACCGA GGACCAGGGC TACTTCATCG TCAACGTGCA ACTGCCCCCT
GGCGCCGCCA AGGAGCGCAC GCTGGAGGTG ATGAAGCAGG TGGAAGAAGC CGTGCTGCCG
CAGCCCGAAG TGGCCAACAT GGTCAGCGTG CTGGGCTTCA GCTTCTCCGG CCAGGGCCAG
AACGCCGCCC TCGCCTTCGT GCCGCTCAAG GACTGGTCCG AGCGCAAGGG AGCGAACTCC
ACGGTGGACG CCATGACGGG CCGCATCATG GGCATGACGT CGGGCATCCG CGATGCCTTC
GTGTTCGCCG TGAACCCGCC GCCCATTCCC GAACTGGGCA ACGCCGTGGG CTTCTCGTTC
CGCCTGCAGG ACCGTGCCGG CCACGGGCAC GATGCGCTGA TCAATGCCCG CAACATGATG
CTGGGCATGG CCGGGCAGAG CAAGGTGCTG GCCGGCGTGC GTCCCGATGG TCTGGAGGAC
GCGCCCCAGC TGCGCATCGA GATCGACCGC GACAAGGCCA ACGCCCTGGG CGTGGACTTC
ACCTCGATCA ATGCCGCGCT GTCCACGGCG CTGGGCTCGT CCTACGTCAA TGACTTCCCC
AACCAGGGTC GTCTGCAGCG CGTGATCGTG CAGGCCGATG CTCCGGCCCG CATGCAGCCC
GACGACCTGC TGCGCCTGAA CGCGCGCAAT GCCAAGGGCG ATCCGGTGCC GCTGTCCACG
TTCGCGACCA CCAAGTGGGT CAAGGGCGCC CAGCAGACGG TGCGCTACAA CGGCTACCCT
GCCGTGCGCA TCGAAGGCTC GGCCGCACCG GGCTTCAGCT CGGGCGATGC CATGGACGAG
ATGGAAAAGC TGGCTGCCAA GCTGCCCGAA GGCTTCGGCT TCGAGTGGAC CGGCCAGTCG
CGCGAGGAAA AGCTGGCGGG CTCGCAAGCC ATCTTCCTGT ACGCCTTCGC CATCCTGGCC
GTGTTCCTGT GCCTGGCCGC CCTGTACGAG AGCTGGTCGA TTCCGCTGTC GGTGATTCTG
GTCGTGCCGC TGGGTCTGCT GGGTGTGGTG CTTGCCACCT TGCTGCGCAA CTACTCCAAC
GACGTGTACT TCCAGATCGG ACTGGTGACG GTGATCGGCC TGTCGGCGAA GAACGCGATC
TTGATCGTGG AGTTCGCCAA GGACCTGCAG GCCGAAGGCA AGGGACTGAT CGAGGCTGCG
CTGGAAGCCG CCCACCTGCG GTTCCGCCCC ATCATCATGA CCTCGCTGGC CTTCGGCCTG
GGCGTGGTGC CTCTGGTGAT CGCCACGGGC GCGAGCTCGG CCAGCCAGCG TGCCATCGGC
ACCGGCGTGC TCGGCGGCAT GATCACCGGC ACCGTGCTGG CCGTGCTGTT CGTGCCCACC
TTCTTCGTCG TGGTGCGCAA GCTGTTCAAG GGCAAGATCA AAACGCACAA CCCGCCGTCC
ACACCGGCCG GCAAGGAGGC CTTGAGCCAT GATTAA
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| Protein sequence | MAKFFIDRPI FAWVVALFII VLGGIALTKL PIAQYPKVAP PAIVINTAYP GASAKVLEDS
VLSVIEREMN GSPGLVYMES VAQADGTGSI TISFEAGTNV DLAQVDVQNR LSRATPRLPA
SVTQQGVRVD KASSNFLLFI MLSSEDAKAY DTVALGDYAS RNIVPEIQRV AGVGQAQLFG
TEKAMRIWFD PAKLQGYKLS AEDVTAAIRS QNAQVASGAI GDLPNITGQK IAATVTVMGQ
LSSIGQFENI VLRANPDGST VRLKDVATVE IGGQAYATSA RLNGKDAVGI GVQLTPSGNA
LATAKAVHAR MEELQKFFPK GVKYSIPYDS SKFVSISIEK VAHTLLEAIV LVFLVMFLFL
QNWRYTLIPT IVVPIALLGT FAVMQAVGFS INVLAMFGMV LVIGIVVDDA IVVVENVERI
MSEEGLQPRE AAIKAMGQIS GAIVGITLVL IAVFIPLAFF AGSTGNIYRQ FSIVMVASIS
FSAFMALTLT PALCATLLKP VEAGHHHEKK GFFGWFNRTF ARSAKSYEGW VARLLKRSVL
MIGVYLAVIA GAVVVFRGLP TSFLPTEDQG YFIVNVQLPP GAAKERTLEV MKQVEEAVLP
QPEVANMVSV LGFSFSGQGQ NAALAFVPLK DWSERKGANS TVDAMTGRIM GMTSGIRDAF
VFAVNPPPIP ELGNAVGFSF RLQDRAGHGH DALINARNMM LGMAGQSKVL AGVRPDGLED
APQLRIEIDR DKANALGVDF TSINAALSTA LGSSYVNDFP NQGRLQRVIV QADAPARMQP
DDLLRLNARN AKGDPVPLST FATTKWVKGA QQTVRYNGYP AVRIEGSAAP GFSSGDAMDE
MEKLAAKLPE GFGFEWTGQS REEKLAGSQA IFLYAFAILA VFLCLAALYE SWSIPLSVIL
VVPLGLLGVV LATLLRNYSN DVYFQIGLVT VIGLSAKNAI LIVEFAKDLQ AEGKGLIEAA
LEAAHLRFRP IIMTSLAFGL GVVPLVIATG ASSASQRAIG TGVLGGMITG TVLAVLFVPT
FFVVVRKLFK GKIKTHNPPS TPAGKEALSH D
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