| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_0479 |
|---|
| Symbol | |
|---|
| ID | 5746016 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | + |
|---|
| Start bp | 510137 |
|---|
| End bp | 512956 |
|---|
| Gene Length | 2820 bp |
|---|
| Protein Length | 939 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641295542 |
|---|
| Product | heavy metal translocating P-type ATPase |
|---|
| Protein accession | YP_001561510 |
|---|
| Protein GI | 160895928 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2217] Cation transport ATPase |
|---|
| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01512] heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 49 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATTGCC CCAGCGAGGA GGCTCAGATT CGCAAGCGCT TGGCGCAGGT CGATGGCGTC
CGGGATATGG CTTTCGACTT GACCCGTCGC CGCCTTGAGG TCACACGCGA ACCAGCTGGA
CAGAACGCCA TCCTGCGCGC GCTGCACGAC ATCGGCATGC GGGCGGTCGT GGAACCCGCG
CCGCAGCAGG TCATCTACTT CATCAAGGAG ATGGACTGTC CCAGCGAAGA GCGCCAGTTG
CGCTCGATGC TGGAGCCACT GGCGGGCGTG CAGGCGGTGG ACTTCGATCT GAAGGCCCAC
ACGCTGACGG TGACCCATTC GCTGACCGAT ACAGCCCCGA TTGCCAGGAC CATCGAAGGC
CTGGGAATGA AGCCGGTGGA AAAGACGGCG GGCAGCATGC CAATCGCTGT CGAAGCCCTC
ATCCCCAGCA CGGCGGCGTC GCAAACCCCG GCACCGGCGA CAGGGAACGG TACACGCTTC
CTTATTCCGA ACATGGATTG CCCTACCGAA GAGGCAACGA TCCGCAAGCG CCTTGGTGCG
GTCGATGGCA TCGAACGGCT GGATTTCGAC CTGATGGGGC GACGGCTCGA TGTCCAGCAC
CGTCTGCCCG ACCCCGCGCC GATCCTCAAG GCCCTGAACG ATGTAGGCAT GAAGGCCAGC
ATTGAGCACG CTGACGACAC CGGGCCGCAG GGCCAGGCCG TGTACCTGAT CGAAAAAATG
GACTGCCCGA CCGAGGAGGG CCTGCTGCGC AAGGCGCTCG AAGGCATGCC TGGGGTGAAG
GCCCTGGATT TCAACCTGAT GGGCCGCACG CTGACCGTGA GCCACGAGCT TGTCGATCTG
GCTCCGGTGA CCAGCGCGAT CGAGCGGCTC GGCATGGCTC CAGTGCTCCA AAGCGCCTCC
GACCCGGCGC CATCCGCTCC CCGTGAGTTC GGCACCGGCA TCTCGCGCGG GCAATGGATT
CGGATGGCGG TCTCCGGCGT GCTGGCGCTC GGCGCGGAGG CCATGGTCTT CGCGGGTGCT
CCCGAGGCCT CCTGGCCCAT CATTCTTGCT TGCCTCGCGG CCATCGGCCT GGGTGGGGTC
GAGACCCTCA AGAAGGGCTG GATCGCGCTG AAGACGCGTT CGCTGAACAT GAACCTGTTG
ATGACGGTCG CCGTCATCGG CGCGGCGCTG ATCGGCCAGT GGCCCGAGGC GGCGGTGGTC
ATCTGGCTCT TCGGCATCGC CGAGATGATC GAGGCCTTGA GCCTGGATCG GGCCCGCAAT
GCCATCCGCA AGCTGATGGA CCTGGCGCCA GAGAACGCAT TGGTGCGCCA GCCCGACGGT
CAATGGCGCG AGGTCAAGGC GGATACCGTG CCACTCGGAA GTGTTGTGCG GGTGCGTCCG
GGCGAACGCA TCGCACTGGA TGGCGAAGTC GTCGCGGGAC AGTCGTCGGT GAACCAGGCG
CCGATCACCG GCGAAAGCAT GCCGGTGGAG AAGACCGCCG GTGCCACGGT CTTCGCCGGC
ACCATCAACG AGCGCGGCAC GCTGGAGTTC CGCGTTACCT CGCGCAAGGG CGAAACCACC
CTCGACCGCA TTGCACGATC GGTCCAGGAA GCGCAGGGAC AACGCGCGCC CACGCAACGC
TTCGTGGACA AGTTCGCCGG CATCTATACA CCCGCGGTGT TTGCGCTTGC CCTTGCCGTG
GCGGTCATTC CTCCGCTCGC TTTCGGGCAG CCCTGGTTCG AATGGGTCTA CAAGGCGCTG
GTGATGCTGG TCATTGCCTG CCCCTGCGCA TTGGTGATCT CCACGCCGGT TACCGTGGTC
AGCGGCCTGG CAGCTGCCGC ACGCCGAGGC ATCCTGGTCA AGGGCGGTCT TTACCTCGAA
CAAGGGCGGC ACCTGAAATC GGTGGCCCTG GACAAGACCG GGACCCTGAC CCATGGGCGC
CCCGCACTGA CCGATGTCAT ATCGCTGCGC GGCCTGCCGA AGGAAGAAGT TCTGCGCATT
GCAGCGAGCA TCGATGCTCT GTCGGAGCAT CCTGTGGCCA CCGCCATCGT GGCGGGCTAC
AACCAACCGC ATGCCCAGGT GGACAAGTTC GAGGCGATCC CTGGACGCGG CGTCAAAGGC
AACGTCGATG GAGATGTCTA TTACGTCGGC AACCACCGGC TGATCAAAGA GCTGGGACTT
TCAACACTTG AGGTCGAGAC TCAGCTCGAT GCGTTGGAGT ACCAGGCCAA GACCGTTGTG
CTCCTCGCCA CGGACCAGCA AGTACTCGCC CTGCTGGCCG TGGCCGACAC AGTGCGCGAC
ACCAGCCGGC AAGCGATCGC CGAACTCAAG TCGCTGGGAA TCGAACCAGT CATGTTGACT
GGCGATAACG CGAAAACCGC GCAAGCCGTG GCTGCCCAGG TCGGCATCAC CAGCGCCAAG
GGCGAGTTGC TGCCGCAGGA CAAGCTGCAG GCAATCGAAG AACTGCTCTC ACGCGGGCCA
GTCGGCATGG TGGGCGACGG CGTCAACGAC GCACCGGCAT TGGCCAAGTC GAGCATAGGC
TTCGCAATGG GCGCAGCTGG CACCGACACG GCAATCGAAA CGGCCGACGT CGCATTGATG
CAGGACAACC TGCGCAAGCT TCCAGAGTTC ATCCGGCTGT CACAGCGCGT AGCCGGCATC
CTGACGGCCA ACATCGTCTT TGCGCTTGGA ACAAAGGCGG TGTTCATGGC CTTGGCCTTT
ACTGGACATG CAAGTCTGTG GCTGGCGATT CTGGCCGACA TGGGTGCCAG TCTGGCGGTC
GTTTTCAATG GGATGCGCTT GCTGCGGTCG TCTGAGGACA TCAAGCCACA TGGCCATTGA
|
|---|
| Protein sequence | MDCPSEEAQI RKRLAQVDGV RDMAFDLTRR RLEVTREPAG QNAILRALHD IGMRAVVEPA
PQQVIYFIKE MDCPSEERQL RSMLEPLAGV QAVDFDLKAH TLTVTHSLTD TAPIARTIEG
LGMKPVEKTA GSMPIAVEAL IPSTAASQTP APATGNGTRF LIPNMDCPTE EATIRKRLGA
VDGIERLDFD LMGRRLDVQH RLPDPAPILK ALNDVGMKAS IEHADDTGPQ GQAVYLIEKM
DCPTEEGLLR KALEGMPGVK ALDFNLMGRT LTVSHELVDL APVTSAIERL GMAPVLQSAS
DPAPSAPREF GTGISRGQWI RMAVSGVLAL GAEAMVFAGA PEASWPIILA CLAAIGLGGV
ETLKKGWIAL KTRSLNMNLL MTVAVIGAAL IGQWPEAAVV IWLFGIAEMI EALSLDRARN
AIRKLMDLAP ENALVRQPDG QWREVKADTV PLGSVVRVRP GERIALDGEV VAGQSSVNQA
PITGESMPVE KTAGATVFAG TINERGTLEF RVTSRKGETT LDRIARSVQE AQGQRAPTQR
FVDKFAGIYT PAVFALALAV AVIPPLAFGQ PWFEWVYKAL VMLVIACPCA LVISTPVTVV
SGLAAAARRG ILVKGGLYLE QGRHLKSVAL DKTGTLTHGR PALTDVISLR GLPKEEVLRI
AASIDALSEH PVATAIVAGY NQPHAQVDKF EAIPGRGVKG NVDGDVYYVG NHRLIKELGL
STLEVETQLD ALEYQAKTVV LLATDQQVLA LLAVADTVRD TSRQAIAELK SLGIEPVMLT
GDNAKTAQAV AAQVGITSAK GELLPQDKLQ AIEELLSRGP VGMVGDGVND APALAKSSIG
FAMGAAGTDT AIETADVALM QDNLRKLPEF IRLSQRVAGI LTANIVFALG TKAVFMALAF
TGHASLWLAI LADMGASLAV VFNGMRLLRS SEDIKPHGH
|
|---|
| |