Gene Daci_0477 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0477 
Symbol 
ID5746014 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp508725 
End bp509246 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content65% 
IMG OID641295540 
ProductMerR family transcriptional regulator 
Protein accessionYP_001561508 
Protein GI160895926 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID[TIGR02051] Hg(II)-responsive transcriptional regulator 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGACCC ATGCATTCAC CATACGCAAA CTCGCCGACG CGGCAGGCGT TGGCGTGGAG 
GCGGTGCGCT ATTACCAGCG CGGTGGATTG CTGGCTGCGC CGGATCGCGT GGACGGCGGC
TTCCGGCAGT ATTCGGAGGA CGATGTCCGT CGTCTGCGCT TCATCAAGCG GGCTCAGGCA
TTGGGGTACT CGCTGGAGGA CATCGCCGAA CTGATGTCCT TGAGTACCAA GCGTGATCGG
CTGCGCGTGC GGGAAATCAC CCGCGAACGC ATCGCGGAGA TCCGGGAGCG CGTGGCCGAC
CTGCAGTCGA TGGCCTCGGC GCTGGAAAAT CTGGCCGATT GCTGCGCCAA AGCGCCAGAA
GGTTCGGCCT GTTCGATCAT CGCCGCGCTG ACCGGGGAGC AGGACTTAGA TCCGGCCATC
GCCGATCCGA GCCTCGTTGC GCAGGCAAGC GTTGCCGGCC GACGCAGATC CGTGCGGCCG
GGCGCTGAAG CCTATCACCG CACTGATGGG GTGGCCGCAT GA
 
Protein sequence
MPTHAFTIRK LADAAGVGVE AVRYYQRGGL LAAPDRVDGG FRQYSEDDVR RLRFIKRAQA 
LGYSLEDIAE LMSLSTKRDR LRVREITRER IAEIRERVAD LQSMASALEN LADCCAKAPE
GSACSIIAAL TGEQDLDPAI ADPSLVAQAS VAGRRRSVRP GAEAYHRTDG VAA