Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_0467 |
Symbol | |
ID | 5746004 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 495889 |
End bp | 497952 |
Gene Length | 2064 bp |
Protein Length | 687 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641295530 |
Product | nuclease |
Protein accession | YP_001561498 |
Protein GI | 160895916 |
COG category | [K] Transcription |
COG ID | [COG1475] Predicted transcriptional regulators |
TIGRFAM ID | [TIGR00180] ParB-like partition proteins |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACGCCG TTACCACTAC CGAAGCCCGC GCCGTCCACA CCGCAGCCAG CAGCGCAGCG AACGTGCTGC AAGCCGCCGA CCCGAGCAAG CACATGATTC TGGTTCCGCT GTCGCGGCTG GTGCTGCGCC CCACGGGCCG CAATGTGCGC AAGACCCCGC GCATGTCCAT CCCCGAACTG GCCGCGAGCA TCCAGGGCGT TGGCCTGCTG CAAAACCTGA TCGTGATTCC CGCCGCTGAT GGCGAGCATT ACGAGGTGGT GGCCGGTGGC CGACGCCTTG CAGCCCTCAA GCTGCTGGCG AAGAAACACC GCATCGCCAA GGATTGGGAG GTGCCTTGCC TGCAGGTGGC CGATGGCACG GCCCGCACGG CCAGCCTCAC CGAAAACGTG CAGCGCGAAG CCATGCACCC CGCAGATCAG TTTGAAGCGT TTGCGGCATT GGTGGCCGAG GGCCGGCCCA TCGAGGACAT TGCGGCGGAT TTCTCCGTCA CGCCGCTGGT GGTGCAGCGC CGCTTGAAGC TGGCGAATGT CTCGCCCCGC CTGATGGCCG ACTATCGCGC CGATGCCGTG ACGCTGGATC AGTTGATGGC GCTGTCCATC ACCGACGACC ACGCCGCGCA GGAGGCCGCG TTCTATGATG CGCCACAGTG GCAGCGCAAC CCGTCCAACT TGCGCGAGCG GCTGACCGAG CGCGAGATTG GGGCATCGCA TCCGCTGGTG CGCTTTGTCG GGTTGGACAC CTACGAGCAG GCAGGCGGAG GCATCCGCCG CGACCTGTTC GCGGAAGGCG ATGCGGGCGT GTACCTCAAC GATGCCGCTC TGCTGGAAAC GCTGGTGCGC CAGAAGCTGG CGAGCATTGC CGACACAATC CGCACCGAGG GCTGGGCATG GGTGGATGCC ACGCCGGGCG TGACCCATGC CGACCTGCAC GCCTTTCAGC GTGCGCCGAG GGAGCGCCGC GCACCGGGCA AGCGCGACGC ACAGCGCATC GAGAAGTTGC AGGCCAAGAT GCAGGAAGTG GCCGAAGCCA TTGATGCCGC GATGGACGCC GACGACGAGG ACAAGGCCGA AGCCTTGCAG GAAGAAGGCG AGCGCCTGGG CGAGCAGTTG CAGGCATTGG AGGATGGCTT GCTGGACTAT GCCGCGAGCG TGAAGGCCGC AGCCGGTGCC ATCGTCACCA TCGACCGCAA CGGCGAAGCC GTCATTCATC GCGGGTTGCT GCGCGAAGCC GAGGCCAAGG CGCTGCGCAC GCTGGAGAAG CTGCGCCAAG GTTTTAGCGG CGCGGAAATC GAAGGCGACG ACGACGGCGA AGATGCCGAC GAAGCACCCA AGGCCGCAGC CATGTCCGAC CGGCTGGCCC AACGCTTGAG CGCCCACCGC ACCGCCGCGC TGCAAACCGA AGTCGCCCGG CATCCGCAGG TGGCGCTGGC GGCGCTGGTG CATGGCATGG TGCAAACCAT CTTGCAGGGC AGTCACTACG GCCACGATCT GCCGCTGGGG GTTCGCCTCA CGGTGCAGGA CAGGCTGGAA GGCATGGCCC CGGACTGGCC GGAATCGCCT GCTGCTGTGG CTCTGCACGA GGCGCAGCAG GCATGGGGCG AGAAGCTGCC CGAGGACAGC GCCGAACTGT TCGCTGCGCT GCTGGCGATG GAGCAAGGCG AACTGGTCAA GCTGCTGGCC GTGTGCGTGG CTTCGACGGT GGACGTGGTG ACGCCGCGTG CCACGGTGCA GCAGCCGGGC GCGGAACTAG CGCAGGCCGT GGGGCTGGAC ATGGCCGCGT GGTGGCAGCC GACTGCCGAG GGGTATTTCC GGCATGTTCC AAAGGCCGTG ATTCTGCGAG CCGTGGGCGA GTACGCGCCC GAGCACGTCA CCCGGTTGGC AAAGCTGAAG AAAGCCGACA TTGCCAGCGA AGCCGAACGA CTGGCCGATG GTACGGGCTG GATGCCCGCC ATCTTCAAGG CCATAGGCTC GCAGGGAGCT GCGCAGGAGG AAGGCCCGGA ACAGGACGCC CCGGAGGATG CCGAGGTAAT GGCGGATGAA CCCGCCGAGG CGCTGGCTGC TTGA
|
Protein sequence | MNAVTTTEAR AVHTAASSAA NVLQAADPSK HMILVPLSRL VLRPTGRNVR KTPRMSIPEL AASIQGVGLL QNLIVIPAAD GEHYEVVAGG RRLAALKLLA KKHRIAKDWE VPCLQVADGT ARTASLTENV QREAMHPADQ FEAFAALVAE GRPIEDIAAD FSVTPLVVQR RLKLANVSPR LMADYRADAV TLDQLMALSI TDDHAAQEAA FYDAPQWQRN PSNLRERLTE REIGASHPLV RFVGLDTYEQ AGGGIRRDLF AEGDAGVYLN DAALLETLVR QKLASIADTI RTEGWAWVDA TPGVTHADLH AFQRAPRERR APGKRDAQRI EKLQAKMQEV AEAIDAAMDA DDEDKAEALQ EEGERLGEQL QALEDGLLDY AASVKAAAGA IVTIDRNGEA VIHRGLLREA EAKALRTLEK LRQGFSGAEI EGDDDGEDAD EAPKAAAMSD RLAQRLSAHR TAALQTEVAR HPQVALAALV HGMVQTILQG SHYGHDLPLG VRLTVQDRLE GMAPDWPESP AAVALHEAQQ AWGEKLPEDS AELFAALLAM EQGELVKLLA VCVASTVDVV TPRATVQQPG AELAQAVGLD MAAWWQPTAE GYFRHVPKAV ILRAVGEYAP EHVTRLAKLK KADIASEAER LADGTGWMPA IFKAIGSQGA AQEEGPEQDA PEDAEVMADE PAEALAA
|
| |