Gene Daci_0467 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0467 
Symbol 
ID5746004 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp495889 
End bp497952 
Gene Length2064 bp 
Protein Length687 aa 
Translation table11 
GC content67% 
IMG OID641295530 
Productnuclease 
Protein accessionYP_001561498 
Protein GI160895916 
COG category[K] Transcription 
COG ID[COG1475] Predicted transcriptional regulators 
TIGRFAM ID[TIGR00180] ParB-like partition proteins 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCCG TTACCACTAC CGAAGCCCGC GCCGTCCACA CCGCAGCCAG CAGCGCAGCG 
AACGTGCTGC AAGCCGCCGA CCCGAGCAAG CACATGATTC TGGTTCCGCT GTCGCGGCTG
GTGCTGCGCC CCACGGGCCG CAATGTGCGC AAGACCCCGC GCATGTCCAT CCCCGAACTG
GCCGCGAGCA TCCAGGGCGT TGGCCTGCTG CAAAACCTGA TCGTGATTCC CGCCGCTGAT
GGCGAGCATT ACGAGGTGGT GGCCGGTGGC CGACGCCTTG CAGCCCTCAA GCTGCTGGCG
AAGAAACACC GCATCGCCAA GGATTGGGAG GTGCCTTGCC TGCAGGTGGC CGATGGCACG
GCCCGCACGG CCAGCCTCAC CGAAAACGTG CAGCGCGAAG CCATGCACCC CGCAGATCAG
TTTGAAGCGT TTGCGGCATT GGTGGCCGAG GGCCGGCCCA TCGAGGACAT TGCGGCGGAT
TTCTCCGTCA CGCCGCTGGT GGTGCAGCGC CGCTTGAAGC TGGCGAATGT CTCGCCCCGC
CTGATGGCCG ACTATCGCGC CGATGCCGTG ACGCTGGATC AGTTGATGGC GCTGTCCATC
ACCGACGACC ACGCCGCGCA GGAGGCCGCG TTCTATGATG CGCCACAGTG GCAGCGCAAC
CCGTCCAACT TGCGCGAGCG GCTGACCGAG CGCGAGATTG GGGCATCGCA TCCGCTGGTG
CGCTTTGTCG GGTTGGACAC CTACGAGCAG GCAGGCGGAG GCATCCGCCG CGACCTGTTC
GCGGAAGGCG ATGCGGGCGT GTACCTCAAC GATGCCGCTC TGCTGGAAAC GCTGGTGCGC
CAGAAGCTGG CGAGCATTGC CGACACAATC CGCACCGAGG GCTGGGCATG GGTGGATGCC
ACGCCGGGCG TGACCCATGC CGACCTGCAC GCCTTTCAGC GTGCGCCGAG GGAGCGCCGC
GCACCGGGCA AGCGCGACGC ACAGCGCATC GAGAAGTTGC AGGCCAAGAT GCAGGAAGTG
GCCGAAGCCA TTGATGCCGC GATGGACGCC GACGACGAGG ACAAGGCCGA AGCCTTGCAG
GAAGAAGGCG AGCGCCTGGG CGAGCAGTTG CAGGCATTGG AGGATGGCTT GCTGGACTAT
GCCGCGAGCG TGAAGGCCGC AGCCGGTGCC ATCGTCACCA TCGACCGCAA CGGCGAAGCC
GTCATTCATC GCGGGTTGCT GCGCGAAGCC GAGGCCAAGG CGCTGCGCAC GCTGGAGAAG
CTGCGCCAAG GTTTTAGCGG CGCGGAAATC GAAGGCGACG ACGACGGCGA AGATGCCGAC
GAAGCACCCA AGGCCGCAGC CATGTCCGAC CGGCTGGCCC AACGCTTGAG CGCCCACCGC
ACCGCCGCGC TGCAAACCGA AGTCGCCCGG CATCCGCAGG TGGCGCTGGC GGCGCTGGTG
CATGGCATGG TGCAAACCAT CTTGCAGGGC AGTCACTACG GCCACGATCT GCCGCTGGGG
GTTCGCCTCA CGGTGCAGGA CAGGCTGGAA GGCATGGCCC CGGACTGGCC GGAATCGCCT
GCTGCTGTGG CTCTGCACGA GGCGCAGCAG GCATGGGGCG AGAAGCTGCC CGAGGACAGC
GCCGAACTGT TCGCTGCGCT GCTGGCGATG GAGCAAGGCG AACTGGTCAA GCTGCTGGCC
GTGTGCGTGG CTTCGACGGT GGACGTGGTG ACGCCGCGTG CCACGGTGCA GCAGCCGGGC
GCGGAACTAG CGCAGGCCGT GGGGCTGGAC ATGGCCGCGT GGTGGCAGCC GACTGCCGAG
GGGTATTTCC GGCATGTTCC AAAGGCCGTG ATTCTGCGAG CCGTGGGCGA GTACGCGCCC
GAGCACGTCA CCCGGTTGGC AAAGCTGAAG AAAGCCGACA TTGCCAGCGA AGCCGAACGA
CTGGCCGATG GTACGGGCTG GATGCCCGCC ATCTTCAAGG CCATAGGCTC GCAGGGAGCT
GCGCAGGAGG AAGGCCCGGA ACAGGACGCC CCGGAGGATG CCGAGGTAAT GGCGGATGAA
CCCGCCGAGG CGCTGGCTGC TTGA
 
Protein sequence
MNAVTTTEAR AVHTAASSAA NVLQAADPSK HMILVPLSRL VLRPTGRNVR KTPRMSIPEL 
AASIQGVGLL QNLIVIPAAD GEHYEVVAGG RRLAALKLLA KKHRIAKDWE VPCLQVADGT
ARTASLTENV QREAMHPADQ FEAFAALVAE GRPIEDIAAD FSVTPLVVQR RLKLANVSPR
LMADYRADAV TLDQLMALSI TDDHAAQEAA FYDAPQWQRN PSNLRERLTE REIGASHPLV
RFVGLDTYEQ AGGGIRRDLF AEGDAGVYLN DAALLETLVR QKLASIADTI RTEGWAWVDA
TPGVTHADLH AFQRAPRERR APGKRDAQRI EKLQAKMQEV AEAIDAAMDA DDEDKAEALQ
EEGERLGEQL QALEDGLLDY AASVKAAAGA IVTIDRNGEA VIHRGLLREA EAKALRTLEK
LRQGFSGAEI EGDDDGEDAD EAPKAAAMSD RLAQRLSAHR TAALQTEVAR HPQVALAALV
HGMVQTILQG SHYGHDLPLG VRLTVQDRLE GMAPDWPESP AAVALHEAQQ AWGEKLPEDS
AELFAALLAM EQGELVKLLA VCVASTVDVV TPRATVQQPG AELAQAVGLD MAAWWQPTAE
GYFRHVPKAV ILRAVGEYAP EHVTRLAKLK KADIASEAER LADGTGWMPA IFKAIGSQGA
AQEEGPEQDA PEDAEVMADE PAEALAA