Gene Daci_0451 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0451 
Symbol 
ID5745988 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp482085 
End bp482777 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content58% 
IMG OID641295514 
Producttwo component heavy metal response transcriptional regulator 
Protein accessionYP_001561482 
Protein GI160895900 
COG category[T] Signal transduction mechanisms
[K] Transcription 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID[TIGR01387] heavy metal response regulator 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCTGT TGGTCGTTGA AGACGAGAAC AAGACGGCGG ATTACGTCCG CCAAGGTCTC 
ATGGAGGCAG GGTTCGTCGT GGATCTGGCG CGTAACGGAT TGGACGGACA CCACTTGGCC
ATGAGCGAGA CCTACGATTT GGTGGTCTTG GATGTCATGC TGCCGGATGT CGATGGCTGG
CGCATCGTGC GTTCGCTGCG AGATGCTGGC AAACAAGTCC CTGTGCTATT TCTAACCGCA
CGTGGCAGCG TAGATGACCG CGTCAAGGGG TTGGAACTGG GGGCAGACGA CTATCTCGTC
AAGCCGTTCG CGTTCTCGGA ATTGCTGGCG CGGGTGCGGA CGCTGCTGCG ACGCGGAAGC
GCTCCGAGCC AGCCTGATCG CATCCAAGTT GCCGATTTGG TGCTGGACTT GCCGCGCCGA
CGTGCAACGC GCGCTGGTCA GCGCATCAAT CTCACCAGCA AGGAGTTCGC GTTGCTCGAA
CTGCTGGCAC GCCGACAGGG TGAAGTTCTG CCGCGTTCGT TGATTGCGTC TCAGGTATGG
GACATGAATT TCGACAGCGA CAGCAACGTC ATTGATGTGG CCATCCGTCG TCTGCGCGCA
AAGATCGACG ATGCGTTCAA TCCAAAGCTC ATCCACACTG TACGTGGCAT GGGATACACG
CTCGATGCGC CTGATGATGA CCTCGCGCCA TAA
 
Protein sequence
MKLLVVEDEN KTADYVRQGL MEAGFVVDLA RNGLDGHHLA MSETYDLVVL DVMLPDVDGW 
RIVRSLRDAG KQVPVLFLTA RGSVDDRVKG LELGADDYLV KPFAFSELLA RVRTLLRRGS
APSQPDRIQV ADLVLDLPRR RATRAGQRIN LTSKEFALLE LLARRQGEVL PRSLIASQVW
DMNFDSDSNV IDVAIRRLRA KIDDAFNPKL IHTVRGMGYT LDAPDDDLAP