| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_0440 |
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| Symbol | |
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| ID | 5745977 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 470074 |
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| End bp | 472095 |
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| Gene Length | 2022 bp |
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| Protein Length | 673 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641295503 |
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| Product | conjugal transfer coupling protein TraG |
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| Protein accession | YP_001561471 |
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| Protein GI | 160895889 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3505] Type IV secretory pathway, VirD4 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGGGA CGAACGTGCT GTTCGGTCAG ATCGCCGTGG TATTCGGCAT CGTGATCGCT
GGCGTATGGA GCGCCACGCA ATGGACAGCA GCAGCCCTTG GCTACCAGCT ACGCCTTGGC
TCGCCCTGGT TCGATCTTCT CGGCACACCG ATCTACCACC CGTGGAAACT GTTCGAGTGG
TGGTTCTTCT TCGATGCCTA CGCGCCGCGC GTGTTCGATA CCGGCGGCGC CATCGCGGGC
GGCAGTGGCC TGCTGGCGGT GGTGGTCGCC ATCGGTATGT CGATCTGGCG CTCGCGCCAA
TCGCGGCTGG TTACGACCTA CGGCTCGGCA CGCTGGGCGA ACGCGGATGA CATTCGCAAG
GCTGGCCTCA CGCAGCCGGC CGGCGTGTTC CTCGGCCAGC ACGACCGCCA GTACCTGCGG
CATGAAGGCC CGGAACACGT CCTGACCTTC GCGCCCACGC GCTCGGGCAA AGGTGTGGGC
CTGGTGGTGC CGACGCTGCT TTCCTGGCCA GCCTCGGCCG TCATCCACGA CATCAAGGGC
GAGAACTGGC AGATCACCGC CGGTTGGCGC TCGCGCTTCT CGCATTGCCT GCTGTTCAAC
CCGACCGATG CGAAGTCAGC GGCCTACAAC CCGCTGCTGG AGGTACGGCG CGGCGCGCAT
GAGGTGCGCG ACGTGCAGAA CATCGCGGAC ATTCTGGTTG ATCCCGAAGG TGCGCTGGAG
AAGCGCAACC ATTGGGAAAA GACCTCGCAC GCGCTACTGG TTGGGGCCAT CCTGCATGTG
CTCTACGCAG GCGAAGACAA GACTCTGCGC GGCGTCGCCA ACTTCCTCTC CGACCCGGCC
AGTCCGTTCG AGCTGACCTT GCATCGGATG ATGACTACGC CGCACCTCGT GAACGAGGAA
GGTGGTGGCC CACATCCCGT GGTGGCATCC GCTGCGCGCG AAGTCCTCAA CAAGAGCGAT
AACGAACGCT CGGGCGTGCT GTCCACGGCC ATGTCGTTCC TCGGCCTGTA CCGCGATCCC
ACGGTGGCCG AAGTCACCTC GCGTTGCGAT TGGCGCATCG CTGACCTGAT CGCTGCCGAG
CATCCGGTAT CGCTGTACCT CGTGGTGCCG CCTTCGGACA TTTCGCGGAC GAAGCCGCTC
ATTCGCCTGA TCCTCAACCA GATCGGCCGG CGCCTCACCG AATCGCTCGA CGGCTCCGAC
GGCATTCAGC GCCGCCACAA GCTGCTGCTG ATGCTCGATG AGTTCCCGGC GCTGGGGCGG
CTCGACTTCT TCGAGACGGC CCTGGCCTTC ATGGCGGGCT ACGGCATCCG CAGCTTCCTC
ATCGCGCAGT CGCTCAACCA GATCGACAAA GCCTATGGCC AGAACCATTC GATTCTGGAC
AACTGCCATG TGCGCGTGAC GTTCGCCACG AACGACGAGC GCACGGCCAA GCGCATTTCC
GAAACGCTCG GCACCGCTAC CGAGCTGCGC GCGCAGCGCA ACTACGCGGG CCATCGGCTC
GCGCCGTGGC TGGGCCACCT GATGGTGTCG CGCCAGGAAA CCGCGCGCCC GCTGCTGACG
CCGGGCGAAG TCATGCAGCT TCCGCCTGAC GAGGCCGTGG TGATGGTGTC CAGCGTGGCG
CCGATCAAGG CGAAGAAGCT GCGCTACTAC GCGGACGCCA ATTTCAAGCG TCGCGTGCTG
CCACCGCCCG CGCTGGCGGA TGGGCAGTAC GCCGACGCGC CGCCATTGCG GCCCGACGAC
TGGAGCGGGT TGGCGATTCC GTCCGTGCCC GCTGCACTGG CCGCCGCGTC CGCTGATGGC
CTGGAGAACT TGGGTTCGGC CGACGACGGC GGCCCGCGCC GTCAGCCCGA ACTCTCCGAA
ACCGTCGCCT ACGACTCCGA GCTGGCCGCT CCCACGGCCG ACCTCGCGCT GCTCGATGAC
GACGACGACC TGCCGCTTCC CCTTCCTCGC CAGCTTGATC CGGCCATGCA GCGCAGCGCC
CGGCTGGCTT CCCTCGACCC CAACGACGGA ATCGAGCTAT GA
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| Protein sequence | MQGTNVLFGQ IAVVFGIVIA GVWSATQWTA AALGYQLRLG SPWFDLLGTP IYHPWKLFEW
WFFFDAYAPR VFDTGGAIAG GSGLLAVVVA IGMSIWRSRQ SRLVTTYGSA RWANADDIRK
AGLTQPAGVF LGQHDRQYLR HEGPEHVLTF APTRSGKGVG LVVPTLLSWP ASAVIHDIKG
ENWQITAGWR SRFSHCLLFN PTDAKSAAYN PLLEVRRGAH EVRDVQNIAD ILVDPEGALE
KRNHWEKTSH ALLVGAILHV LYAGEDKTLR GVANFLSDPA SPFELTLHRM MTTPHLVNEE
GGGPHPVVAS AAREVLNKSD NERSGVLSTA MSFLGLYRDP TVAEVTSRCD WRIADLIAAE
HPVSLYLVVP PSDISRTKPL IRLILNQIGR RLTESLDGSD GIQRRHKLLL MLDEFPALGR
LDFFETALAF MAGYGIRSFL IAQSLNQIDK AYGQNHSILD NCHVRVTFAT NDERTAKRIS
ETLGTATELR AQRNYAGHRL APWLGHLMVS RQETARPLLT PGEVMQLPPD EAVVMVSSVA
PIKAKKLRYY ADANFKRRVL PPPALADGQY ADAPPLRPDD WSGLAIPSVP AALAAASADG
LENLGSADDG GPRRQPELSE TVAYDSELAA PTADLALLDD DDDLPLPLPR QLDPAMQRSA
RLASLDPNDG IEL
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