| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_0438 |
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| Symbol | |
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| ID | 5745975 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 468555 |
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| End bp | 469616 |
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| Gene Length | 1062 bp |
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| Protein Length | 353 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641295501 |
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| Product | P-type conjugative transfer ATPase TrbB |
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| Protein accession | YP_001561469 |
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| Protein GI | 160895887 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
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| TIGRFAM ID | [TIGR02782] P-type conjugative transfer ATPase TrbB |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCCG CGCCTTCATC CCTCACCACC TCGCTCGACC GCCGCATCCA GATGCTGCGC
ACGGCGATGG GGCCGCTGAT CGCCGCCGCG CTCGAAGACC CGGACGTGGT GGAGGTGATG
CTGAACCCCG ATCGCACCCT TTGGGTGGAT CGGCTTTCCA GTGGGCGCGC GCCGATGGGC
GCGGAGTTGC CGGAGACGGA CGGCGAGCGA ATCATCCGCT TGGTCGCGGC CCACGTTGGC
GCAGAAGTCC ATCGCGGGCA ACCGCTGCTG TCCGCCGAGT TGCCCGAAAC CGGCGAACGC
TTCGAGGGCA TCTTGCCGCC CGCTGCGCCG GGGCCGGCCT TCGCGCTGCG CAAGCGCGCC
ATCGGCGTCA TCCCTCTGTC GCGCTACATC GAGGACGGAA TGATGACCGC CGAGCAGGCG
GGCTTTCTCG TTCGCGCCGT GCGCGAGCGC CAGAACGTCC TGATCGCAGG AGCCACGAGC
AGCGGCAAGA CCACGCTCGC CAATGCGCTG CTGGCCGAGA TCGCCGCCAC GGGCGACCGC
GTACTGGTGC TCGAAGACAC CATCGAGTTG CAATGCGCGG CCCGCGACCA TGTGCCGCTG
CGCACGCGCG CCGGCGTCGT GTCCATGACC GAACTGGTGC GGTCGTCCAT GCGCCTGCGG
CCTGATCGCG TCGTCGTCGG CGAGGTGCGC GGCGCCGAGG CGCTGGATCT CATCAAGGTG
TGGGGCACCG GCCATCCGGG CGGTATCGCC ACGATCCACG CCGGCTCCGC GCTCGGCGCG
CTGCTGCGCC TGGAGCAACT GATTCTCGAA GTGGCGGTGA ACCCGCCGCG TGCGCTGATC
GCCGAGGCGG TCAACGTGGT GATCCATATC GCCGGGCGCG GGCGCAAGCG CCGCATCGAG
AGCATCGCCC GCGTCGTCGG CTTTGACGGC GTGGGCTACC GATTGGCGGA TTGGGAGGCG
GACGCGCTGG ACACGCCGTT TCCCGAGTTG TCGCCAAACC CCGATGCCGT ACCCGCTGCG
GCGACTTCCT CATCCCTTGA CTCACTTGGA GAACTGCCAT GA
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| Protein sequence | MSAAPSSLTT SLDRRIQMLR TAMGPLIAAA LEDPDVVEVM LNPDRTLWVD RLSSGRAPMG
AELPETDGER IIRLVAAHVG AEVHRGQPLL SAELPETGER FEGILPPAAP GPAFALRKRA
IGVIPLSRYI EDGMMTAEQA GFLVRAVRER QNVLIAGATS SGKTTLANAL LAEIAATGDR
VLVLEDTIEL QCAARDHVPL RTRAGVVSMT ELVRSSMRLR PDRVVVGEVR GAEALDLIKV
WGTGHPGGIA TIHAGSALGA LLRLEQLILE VAVNPPRALI AEAVNVVIHI AGRGRKRRIE
SIARVVGFDG VGYRLADWEA DALDTPFPEL SPNPDAVPAA ATSSSLDSLG ELP
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