Gene Daci_0417 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0417 
Symbol 
ID5745954 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp450308 
End bp450847 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content62% 
IMG OID641295480 
ProductF0F1 ATP synthase subunit delta 
Protein accessionYP_001561448 
Protein GI160895866 
COG category[C] Energy production and conversion 
COG ID[COG0712] F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) 
TIGRFAM ID[TIGR01145] ATP synthase, F1 delta subunit 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.497202 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones62 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGAAC TCGCCACCAT TGCCCGTCCT TACGCAGATG CCCTGTTCAA GGCCAGCACC 
CAGCAGGGTG CTGACCTGTC CGGCACTGTT GCCTGGGCGG AGGAATTGGC GGCGATTGCC
GCCAATCCGC AATTGCGCCA GCTGGCCGAC GACCCCAAGG TGACCGACGA ACAACTGTTC
GACGTCATCA GCGGCGTGGC CGGCTCGGCA TTGCCTGATG CCGCTCGCAA CTTTCTGCGC
GTCATCATTG AAAACGGCCG ACTGCAAGCC CTGCCAGAAG TGGCGGCTCA GTTTCGCAGC
CTCGTGAACC GCGCCGGTGG CTCGTCCGAC GCCGTGGTTC AAAGCGCTTT TCCCATAGAT
GCTGCCGCTC TGGCTGCCCT CGGGACTTCG CTGGAGAAGC GTTTCGGCCG AAAGCTGAAC
CTGTCGGTGC AGCAAGATCA GTCCCTGATC GGTGGCATCC GCGTCGTGGT GGGTGATGAA
GTTCTTGACA CGTCCGTCAA GGCCCGCCTG GAACAAATGA AAGCGGCCCT CATTGCGTAA
 
Protein sequence
MAELATIARP YADALFKAST QQGADLSGTV AWAEELAAIA ANPQLRQLAD DPKVTDEQLF 
DVISGVAGSA LPDAARNFLR VIIENGRLQA LPEVAAQFRS LVNRAGGSSD AVVQSAFPID
AAALAALGTS LEKRFGRKLN LSVQQDQSLI GGIRVVVGDE VLDTSVKARL EQMKAALIA