Gene Daci_0403 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0403 
Symbol 
ID5745940 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp440043 
End bp440801 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content68% 
IMG OID641295466 
Productcytochrome B561 
Protein accessionYP_001561434 
Protein GI160895852 
COG category[C] Energy production and conversion 
COG ID[COG3658] Cytochrome b 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones63 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCATC CCCATCCCCA TCCCCATCCC CATCCCCACC CGCATCCCAG CTTTCATGCC 
ATGGCACAAG AATCGACCGC ACAAGGCGCC GCCAAGCACA AGGTCCGCAT CTGGGACCTG
CCCACCCGTC TGTTTCACTG GCTGCTGGCC GCAACGGTGG TCGGCCTGGT CGTGACGGCC
AAGCTGGGCG GCAATGCCAT GAACTGGCAT CTGCTGCTGG GCCATGCCAT GCTGGCCCTG
CTGCTGTTTC GCCTGCTTTG GGGCCTGGTG GGCGGCCGCT GGTCGCGCTT TGCCAGCTTC
ATCCACGCGC CCGCCACCGT GCTGCGCCAT GTGCGGGGAC AAGGAACGGA GAGCGACAGC
GCAGGCCACA GCCCGCTGGG CGCCCTGTCC GTGTTTGCCA TGCTGGCCGT GCTGATCGCC
CAGGTGGGCA GCGGGTTGCT CAGCGACGAC GAGATTGCGT TCTCCGGGCC GCTGAGCCGC
TTCGTATCGG GTGACACCGT GGCACAGGCC ACCGCCTACC ACGCGCACTG GGGGCAGTAT
CTGCTGTACG CGCTGGTGGC CCTGCACCTG TTGGCCATCC TGTTCTATGC CTGGCGCGGA
CGGGGTCTGG TGCGCGCCAT GGTGACGGGA GACAAGCACT TGCCCGAACC CCTGCCCTCT
TCACGCGACA CGGCAGCCAG CCGCCTGTTG GCCTTGGTCC TGGCGTTGGT GGCGGGGGCC
GCCGCATGGT GGGTGCAGCA GCTGGGGGGT GCTTTCTGA
 
Protein sequence
MPHPHPHPHP HPHPHPSFHA MAQESTAQGA AKHKVRIWDL PTRLFHWLLA ATVVGLVVTA 
KLGGNAMNWH LLLGHAMLAL LLFRLLWGLV GGRWSRFASF IHAPATVLRH VRGQGTESDS
AGHSPLGALS VFAMLAVLIA QVGSGLLSDD EIAFSGPLSR FVSGDTVAQA TAYHAHWGQY
LLYALVALHL LAILFYAWRG RGLVRAMVTG DKHLPEPLPS SRDTAASRLL ALVLALVAGA
AAWWVQQLGG AF