| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_0391 |
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| Symbol | rplC |
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| ID | 5745928 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 433889 |
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| End bp | 434563 |
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| Gene Length | 675 bp |
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| Protein Length | 224 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641295454 |
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| Product | 50S ribosomal protein L3 |
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| Protein accession | YP_001561422 |
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| Protein GI | 160895840 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0087] Ribosomal protein L3 |
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| TIGRFAM ID | [TIGR03625] 50S ribosomal protein L3, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00000000698132 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 67 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTCTGA GCAACTCCCT CGGGTTGCTG GGTCGCAAGG TGGGCATGAT GCGTCTGTTC
ACCGATGACG GGGACGCAGT GCCCGTCACG GTGGTGGATG TGTCCAACAA CCGTGTGACT
CAGGTCAAAA CCCAAGAGAA CGATGGCTAC GTGGCCCTGC AGGTCACTTT CGGTTCGCGC
AAGGCATCTC GCGTGACCAA GCCAGAAGCC GGCCACCTTG CCAAGGCAGG TGTCGAAGCC
GGTGAAGTGA TGGGTGAATT CCGCGTGACC GAAGAAACCG CTGGCAAGTA CGCCGCAGGC
TCCGTCCTGC CCGTCGCCGA GCTGTTCTCG GTGGGCCAGA AGGTGGACGT GCAAGGCACT
TCCATCGGTA AGGGCTTCGC CGGCACCATC AAGCGTCACA ACTTCCGCTC GCAGCGCGCC
TCGCACGGCA ACAGCCGTTC GCACAATGTT CCCGGCTCCA TCTCGATGGC CCAGGATCCA
GGTCGCGTGT TCCCGGGCAA GAAGATGACC GGTCACATGG GCGATGAAAC CATCACCACC
CAAAATCTCG ACGTGGTTCG CATTGACGAA GCACGCCAAC TGCTCTTGAT CAAGGGCGCT
GTTCCGGGCT CCAAGGGTGG CTTCGTGACG GTGCGCCCCG CCATCAAGGC CAAAGCTTCC
AAGGGAGCGA ACTAA
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| Protein sequence | MSLSNSLGLL GRKVGMMRLF TDDGDAVPVT VVDVSNNRVT QVKTQENDGY VALQVTFGSR
KASRVTKPEA GHLAKAGVEA GEVMGEFRVT EETAGKYAAG SVLPVAELFS VGQKVDVQGT
SIGKGFAGTI KRHNFRSQRA SHGNSRSHNV PGSISMAQDP GRVFPGKKMT GHMGDETITT
QNLDVVRIDE ARQLLLIKGA VPGSKGGFVT VRPAIKAKAS KGAN
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