Gene Daci_0372 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0372 
Symbol 
ID5745909 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp413870 
End bp414517 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content66% 
IMG OID641295435 
Productmultiple antibiotic resistance (MarC)-related protein 
Protein accessionYP_001561403 
Protein GI160895821 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2095] Multiple antibiotic transporter 
TIGRFAM ID[TIGR00427] membrane protein, MarC family 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones62 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCTCA AACCGCTGAT CACGCTGGTG GCCATCATCA ACCCGCTGGC CATCGTCCCC 
TTCTTCATCC ACTACACCGA GGGATTCAGC GCCCAGCAGC GCCAGCAGAC CATTCGCACG
GCGGCGCTGG CCTCGTTCTG CGTGATCGCT GCCTGCGCCA TCATCGGGCT GCAGGTGCTG
GACTTCTTCA ACATCTCGCT GCAGAGCTTT CAGGTGGGCG GCGGCCTGCT GCTGCTGATC
AGCGCGATGA ACATGCTCAA CGCCCGCCCG GCCGAGGAAC GGCCCAACGC GCCCACGCTG
GTCGCTGGCG CGGAAAAGGC TGCCATGGGC AACAGCATTG CCGTGGTGCC GCTGACGATT
CCGCTGCTGA CAGGGCCGGC CTCCATGTCC ACCGTGGTGA TCTACGCCGA CCAGGCACGC
ACCATCTGGC AGCACCTGGC CCTGGTGGGC TATGGCGTGG TGGTGGCGCT GGTGGTGATG
GTCTGCTTTT CGCTGGCCGA CCCGATCGCC CGCGTGCTGG GCAAGACCGG CATCAACGTG
ATGACGCGGC TCATGGGCCT GATCCTCGCG GCCCTGGCCG TGGAGGTGAT GGCGGGCGGG
CTGGTGAAGA TCTTCCCCAT CCTGGCCTCG CCCGCGATCG TGCCCTGA
 
Protein sequence
MDLKPLITLV AIINPLAIVP FFIHYTEGFS AQQRQQTIRT AALASFCVIA ACAIIGLQVL 
DFFNISLQSF QVGGGLLLLI SAMNMLNARP AEERPNAPTL VAGAEKAAMG NSIAVVPLTI
PLLTGPASMS TVVIYADQAR TIWQHLALVG YGVVVALVVM VCFSLADPIA RVLGKTGINV
MTRLMGLILA ALAVEVMAGG LVKIFPILAS PAIVP