Gene Daci_0365 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0365 
Symbol 
ID5745902 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp407693 
End bp408823 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content69% 
IMG OID641295428 
Producthypothetical protein 
Protein accessionYP_001561396 
Protein GI160895814 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0767] ABC-type transport system involved in resistance to organic solvents, permease component 
TIGRFAM ID[TIGR00056] conserved hypothetical integral membrane protein 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones64 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTCTGCCC TCAACAATCC ACCCCAATGC AGCCTGCGCC GCGACAACGA CGGCCAGTGG 
GCGTTGCTGA CCGGTTCCTG GGGCGCGGCC GAGCTGGGCC GGCGGGCGCA GTGGCGCAAG
CTGCGTGCGC AGCTGGCCGA TGCCAAGGGC GATGACCTGG GCTGGAACCT CGAAGGGCTG
GACTGGCTGG ACCACGTGGG CGCGCAGCTG CTGTGGAACC ACTGGGGTCG TCGCCTGCCC
GCGCGCCTGG CGGCCAGCGA TGCGCAGCGC GCCATGCTCG AACGCGTGGG CCGTTTCTCC
AAGGAGCCTG CGCCGCCGCC CCCGCGCCTG AACCTGCTGG AGCGCATCGA CAGCCTGGGC
TGCCTGGTGA TCAACGCCTG CGGCCATTTC GCGCAGATGA CGCGGCTCAT CGGCCAGTTG
CTGATCGACC TGCTGCGCTT TGCGCGTGCG CCGCACCGGG GGCCCTGGCG CGACATCTCC
GGCCATCTCT ATTCCATGGG CGCCACGGCC CTGCCCATCA CGGCCCTGGT GGGCTTTCTG
ATCGGCGTGG TGCTGGCCTA CCTTATGGCG CTGCAGCTGC GCCAGTTCGG GGCTGAATCC
TTCATCGTCA ACATCCTGGG CATCTCGCTG ATCCGCGAGC TGGGTCCGCT GCTGGCGGCC
ATTTTGGTGG CGGGCCGCAC GGGCTCGGCC ATCACCGCCC AGATCGGCGT CATGCGCGTG
ACCGAGGAAT TGGATGCCAT GCAGGTCATG GGCATACCGC ACGGCTTTCG CCTGGTGCTG
CCGCGCGCGC TGGCGCTGGC CATCGCCATG CCCCTGGTCT CGCTGTGGAC CACGCTGGCC
GCGCTGGCCG GCGGCATGCT CGCGGCCGAC CTCACCATGG GCGTCACGGG CGCCTACTTT
GCCGAGGCCC TGCCTGCCGC CGTGAAGATC GGCAACCTCT GGATCGCCAT GGGCAAATCC
GTGGTCTTCG GCGCCCTCAT CGCCCTGATC GGCTGCCACT GGGGCCTGCG CGTGGAGCCC
AATACGCAGA GCCTGGGCAA GGGCACGACG GCCTCGGTGG TGACGGCCAT CACCATGGTC
ATCGTGGTGG ACGCGATCTT CGCCATCTTG TTCAAGGACG TAGGCATCTG A
 
Protein sequence
MSALNNPPQC SLRRDNDGQW ALLTGSWGAA ELGRRAQWRK LRAQLADAKG DDLGWNLEGL 
DWLDHVGAQL LWNHWGRRLP ARLAASDAQR AMLERVGRFS KEPAPPPPRL NLLERIDSLG
CLVINACGHF AQMTRLIGQL LIDLLRFARA PHRGPWRDIS GHLYSMGATA LPITALVGFL
IGVVLAYLMA LQLRQFGAES FIVNILGISL IRELGPLLAA ILVAGRTGSA ITAQIGVMRV
TEELDAMQVM GIPHGFRLVL PRALALAIAM PLVSLWTTLA ALAGGMLAAD LTMGVTGAYF
AEALPAAVKI GNLWIAMGKS VVFGALIALI GCHWGLRVEP NTQSLGKGTT ASVVTAITMV
IVVDAIFAIL FKDVGI