| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_0288 |
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| Symbol | |
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| ID | 5745824 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 321388 |
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| End bp | 322794 |
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| Gene Length | 1407 bp |
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| Protein Length | 468 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641295350 |
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| Product | transcriptional regulator |
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| Protein accession | YP_001561319 |
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| Protein GI | 160895737 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.634833 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGACA CCAGAGGGCG CTCGGCCCCC ATTGCCGAGA AGCTGGCCGA CCTGATCGGC
CAGCAGATCG CCGACGGCGT GTACCGCCCC GGCGACAAGC TGCCTTCGCT GCGCGAGCTG
GCGCAGCTGC ACCGCTATGC CAAGAACACC GTGGTCTCGG CCTTCGACCT GCTGGTCTCG
CGCGGCATCG TGGAGCCGCG CCGGGGCTCG GGCTTTTACG TGCTGGGCTC GGGCCGCGGT
GCCCAGCGCA CCGATGAGGA CGCGGGCCAG CTGGGCCGCG CCATGGACAT CGTCTGGCTG
ATGCGCGAGC AGCTCAAGAC CCAGCCCGAC TGCGTGGGCG TGGGCGACGG CTTTCCGCCC
GTGGAATGGC TGGCCGACAT GCGGCTGGAC CGCTACCACC AGAAGGTGGT GCGCACGGGG
CTGGGATCGC TGTTCCGCTA CGGCAGCCGC TACGGCTATG CGCCGCTGCG CGACAGCCTG
GTGCGCAAGC TGGGTGACTT CGGCCTGCAG GCCACGCCGG GCCAGCTGGT GCTGACCCAT
GGCGCCAACG AGGCCATGGA CCTGGTCATC CGCTACTTCG TGCCGCCGGG CGCCACCGTG
CTCGTGGACG AGCCCGGCTA CTACCCGCTG TTCGGCAAGC TCAGGCTGGC CGGCGCCCAT
GTGGTCGGCG TGCCGCGCCT GGCCGACGGG CCCGACGTGG CCGCGCTCGA ATCACTGCTG
GCCCAGCACC GGCCGCGCCT GTTCTTCACG CAGTCGCTGG CCCACAATCC CACGGGCTCG
GACATCTCGG CCGCCAAGGC CTACAAGGTG CTGCAGCTGG CCGAGCGCCA CAACCTGCTC
ATCGTCGAGG ACGATCCGCT GGCCGACTTC AAGCCCACCT CGGCCGTGCG CCTGTCCACG
CTGGACCAGC TGGAGCGCAC CATCTACATC GGCAGCTTCT CCAAGTCCTT CTCGGCCGCG
CTGCGCGTGG GCTTCATCGC CTGCAACGAT GCGCTGGCCA GCGACCTGGC CGACCTCAAG
GCGCTGATCC ACGTCAGCGG CTCCGAGTAC TGCGAGCGCA TGGTGGACGT GATGCTGCGC
GAAGGCCACT ACGAGCGCCA CCTGGTGCGC CTGCGCCACA AGCTGGGCCA GGCCACGGCC
CAGGCGCTGG GCTGGCTCGA TGCCCACGGC TGCGAGGTCT TTGCGCGCAG CCCGCAAAGC
CTGTACCTGT GGGTGGCCTT CCCAGGTGTG CAGGACTCGC TGCGGCTGGC CGAGCAACTG
GTGCCGCGCA AGCTCAGCAT GGCGCCGGGC CGTGTCTTCC ATGTCGATCC CTCGGCCGTC
TCGCGCTGGT CGCGCTGCAA CGTCAGCGCC ATGCTCGATC CGAGGTTCCA GGCCGCGATG
GGGCAGGTGC TGGCTCACCC CGCCTGA
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| Protein sequence | MADTRGRSAP IAEKLADLIG QQIADGVYRP GDKLPSLREL AQLHRYAKNT VVSAFDLLVS
RGIVEPRRGS GFYVLGSGRG AQRTDEDAGQ LGRAMDIVWL MREQLKTQPD CVGVGDGFPP
VEWLADMRLD RYHQKVVRTG LGSLFRYGSR YGYAPLRDSL VRKLGDFGLQ ATPGQLVLTH
GANEAMDLVI RYFVPPGATV LVDEPGYYPL FGKLRLAGAH VVGVPRLADG PDVAALESLL
AQHRPRLFFT QSLAHNPTGS DISAAKAYKV LQLAERHNLL IVEDDPLADF KPTSAVRLST
LDQLERTIYI GSFSKSFSAA LRVGFIACND ALASDLADLK ALIHVSGSEY CERMVDVMLR
EGHYERHLVR LRHKLGQATA QALGWLDAHG CEVFARSPQS LYLWVAFPGV QDSLRLAEQL
VPRKLSMAPG RVFHVDPSAV SRWSRCNVSA MLDPRFQAAM GQVLAHPA
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