Gene Daci_0261 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0261 
Symbol 
ID5745797 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp294058 
End bp295032 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content66% 
IMG OID641295323 
Productinner-membrane translocator 
Protein accessionYP_001561292 
Protein GI160895710 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4177] ABC-type branched-chain amino acid transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGGAT TCATCGACTC CCGCGTTGCC TGGGGCCTGC TGCTGGCCGC CGGCATCGCC 
TTCCCCTGGC TGGCGGGCAA CGACTACCAC CTCACGGTGA TGAGCACGGC CTACATCTTC
GCCATCGCCA CGCTGGGCCT GAACCTGATC ACGGGCTACA CGGGCCAGCT CAATCTGGCG
CACGCAGGCT TCATGGCCGC GGGCGCCTAT ACCGTGGGCA TCCTCACGGT GGACCATGGC
TGGCCGTTCT GGGGCGGGCT GGTGATGTCG GGCGTGGTGT GCGCGGTGCT GGGCTACCTG
ATCGGCATCG TCTCGCTGCG CCTGAAGGGG CACTACTTCT CGATCTTCAC GCTGTGCGTG
GGCTACATCA TGTTCCTCGT GATCGAGAAG TGGGAGGGCC TGACCCACGG CACGGTGGGC
ATCATGGGCA TCCCCGCGCC CGAGGCCCTG GGCGCGCTGA GCTTCGAGTC GCCGCTGGCG
CTGTACTACC TGGTGCTGGC CTTCCTCGTG GCCTCGGTCT GGGTGATGCG GCGCATCGTC
CGGTCGCTGC TGGGCCGCAC CTTCATGGCC ATCCGCAACA GCGACGAGCT GGCCGAGGCG
CTGGGCATCA ACCTCATGCG CAACAAGGTG CTGGCCTTCA TGCTGAGCGT GGTCTACGCG
GGCGTGGCGG GCGGCCTGTA CGCCGGCTTC GTGCGCTTCA TCGGTCCCGA CATGGCCGGC
GTGCACCACA CCTTCGACAT GATGATCTTC GCCATGGTCG GCGGCATGGG CACGGTGCTG
GGGCCGCTGC TGGGCGCCAT CGGCATGCCC TGGATCACGC AGTACCTGCA GTTCCTGCAG
GAGTACCGCT TCATCGTCTT CGGCCCGATT CTCGTGATGC TGGTGATCTT CATGCCCTAC
GGCGTGGTGG GCAGCTTCAC CGCATGGCGC GCGCGCCGCA ATGCCAAGGA GGGCAAGCCG
CATGCTCAAG ATTGA
 
Protein sequence
MNGFIDSRVA WGLLLAAGIA FPWLAGNDYH LTVMSTAYIF AIATLGLNLI TGYTGQLNLA 
HAGFMAAGAY TVGILTVDHG WPFWGGLVMS GVVCAVLGYL IGIVSLRLKG HYFSIFTLCV
GYIMFLVIEK WEGLTHGTVG IMGIPAPEAL GALSFESPLA LYYLVLAFLV ASVWVMRRIV
RSLLGRTFMA IRNSDELAEA LGINLMRNKV LAFMLSVVYA GVAGGLYAGF VRFIGPDMAG
VHHTFDMMIF AMVGGMGTVL GPLLGAIGMP WITQYLQFLQ EYRFIVFGPI LVMLVIFMPY
GVVGSFTAWR ARRNAKEGKP HAQD