Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_0259 |
Symbol | |
ID | 5745795 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | + |
Start bp | 291965 |
End bp | 292957 |
Gene Length | 993 bp |
Protein Length | 330 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641295321 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001561290 |
Protein GI | 160895708 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGAACAAT GCAGCGAAAG TCCCCGGGCA CCGAGGCCCG GGGCCAAGGA CAACATGGAC CGATTGCAGA CCATGCGGGT GTTTCAGACC GTGGCCGACG AGGCCGGGTT TTCGGCGGCG GCGCGTCGCC TGGACATGTC CGTGCCCACG GTCACGCGCC TGGTGGCCGA CCTGGAGCAG CACCTGGGCA CGCGGCTGCT GCAGCGCACC ACGCGCAGCG TGTCGCTGAC CGAGGCCGGC GAGGCCTATC TGGAGCGCGT GCGCGGCATC CTGGCCGATG TGGAGGATGC CTTCAGCCTG GCGCAGGCGC ACACGCTGGA GCTGTCGGGC GCCGTGCGCG TGCTCACGCC GCCCGTGTTT GCCGAGCATG TGCTGGCGCC GCTGGTGGCG GACTTCCACC GGCTGCACCC GCGCATCTGC ATCGAGGTCT TCGTGGAGTC GGCCAGCGAG GCCGCCGTGG GCGAGTACGA CATCACCTTC CTCAACGCCG AGGAGGGCTA TGACGGCAAC GTGGTGGCGC GGCCCATCGT CACCACCTGC GGCCTGGCCT GCGCCTCGCC CGAGTACCTG GACGCCCATG GCGTGCCCGC CGTGCCCGAG GATCTGGCGG GCCACCAGTG CCTGCTGCGC CGCCGCGCCC AGGGCCGCTC CGACGTGCTG CGCCTGCGCC GGCTCGATGG CAACGCGGGC GAGGCCGAGG TGGCCGTGCA GCCCGTGCTG GTGGCCAACC ACACCGGCAC GCTGCTGCGT GCCACGCTGG ACGGCGCGGG CATCAGCACC CAGCCGCTGG ACCTGATCGC GCGCCACCTG CGCTCGGGCC GCCTGCGCCA TGTGTTGCCC GAATGGACCA CGGGCCATTT CACGCTCTAC GCCACCTTGC CCACGCGCAA GTTCATGCCG GCGCGCGTGC GCAGCTTCCT GGACTTCGTG GCCGAGCACA CGCAGCGCTC CATGCAGGGC CTGCCCGCCA ACTTGCCGGC CCTGTCCATC TGA
|
Protein sequence | MEQCSESPRA PRPGAKDNMD RLQTMRVFQT VADEAGFSAA ARRLDMSVPT VTRLVADLEQ HLGTRLLQRT TRSVSLTEAG EAYLERVRGI LADVEDAFSL AQAHTLELSG AVRVLTPPVF AEHVLAPLVA DFHRLHPRIC IEVFVESASE AAVGEYDITF LNAEEGYDGN VVARPIVTTC GLACASPEYL DAHGVPAVPE DLAGHQCLLR RRAQGRSDVL RLRRLDGNAG EAEVAVQPVL VANHTGTLLR ATLDGAGIST QPLDLIARHL RSGRLRHVLP EWTTGHFTLY ATLPTRKFMP ARVRSFLDFV AEHTQRSMQG LPANLPALSI
|
| |